Return to main results Retrieve Phyre Job Id

Job DescriptionP39361
Confidence82.57%DateThu Jan 5 11:59:52 GMT 2012
Rank345Aligned Residues38
% Identity11%Templated1ttya_
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10........ .20.........30.........40....
Predicted Secondary structure  ...





Query SS confidence 











. . .

























Query Sequence  DRIKQMLHYLWQ. . . HRHLSTQQAMELFGYAEATVRRDFQY
Query Conservation 

   

  
  ...   
 
 


    

  





  
Alig confidence 











...

























Template Conservation 



 

   
 
      
  


  



   

    
Template Sequence  PREAMVLRMRYGLLDGKPKTLEEVGQYFNVTRERIRQIEVK
Template Known Secondary structure  TTTTSS


T

Template Predicted Secondary structure 









Template SS confidence 








































   333......340.........350.........360.........370...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions