Job Description P39361 Confidence 82.36% Date Thu Jan 5 11:59:52 GMT 2012 Rank 348 Aligned Residues 69 % Identity 9% Template d1t6sa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ScpB/YpuH-like Resolution 1.95

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.																.	.																		.	.	.	.	.	.
Query SS confidence																		.																.	.																		.	.	.	.	.	.
Query Sequence		M	S	Q	Q	R	P	D	R	I	K	Q	M	L	H	Y	L	.	W	Q	H	R	H	L	S	T	Q	Q	A	M	E	L	F	.	.	G	Y	A	E	A	T	V	R	R	D	F	Q	Y	I	V	N	Q	.	.	.	.	.	.	Y	P	G	M	I	R	G	H	G	C	L	D	F	D	D	S	T	D	D	K	E
Query Conservation																		.																.	.																		.	.	.	.	.	.
Alig confidence																		.																.	.																		.	.	.	.	.	.
Template Conservation
Template Sequence		M	Q	E	Q	R	Q	Q	L	L	R	S	L	E	A	L	I	F	S	S	E	E	P	V	N	L	Q	T	L	S	Q	I	T	A	H	K	F	T	P	S	E	L	Q	E	A	V	D	E	L	N	R	D	Y	E	A	T	G	R	T	F	R	I	H	A	I	A	G	G	Y	R	F	L	T	E	P	E	F	A	D
Template Known Secondary structure																					S	S		B									T	T																							T		S							T	T								G	G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions