|   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
|
. | . | . | 120 | . | . | |
. | . | . | . | . | . | |
|
|
|
|
|
|
. | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|  |  | . |  |
|
|
|  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| . |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
R | T | L | Q | S | V | A | K | R | E | I | A | A | L | A | R | T | M | I | K | D | G | D | C | F | F | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | S | G | S | T | C | L | E | L | A | K | C | L | A | . |
. |
D | A | R | V | K | V | . |
I | C | N | D | I | K | . |
. |
. |
. |
. |
. |
. |
I | A | N | E | L | G | C | F |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |
|
|
|
| . | . | . | . | . | . | . | . | . |
|   |
|
|
|   |   |   |
|
|   |   |
|   | . | . |   |   |   |
|
|
| . |
|
|
|
|
|   | . | . | . | . | . | . | . |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |
|
|
|   |   |
|   |   |
|   |   |   |
|
|   |   |   |
|   |
|   |
|
|
|
|   |   |
|
|   |
|
|
|
|   |
|
|   |   |   |
Template Sequence |   |
A | E | E | D | V | E | R | N | R | K | M | G | E | Y | G | A | E | L | L | E | D | G | D | V | V | L | T | Y | C | N | A | G | R | L | A | T | V | D | W | G | T | A | L | G | V | V | R | S | A | V | E | Q | G | K | E | I | R | V | I | A | C | E | T | R | P | L | N | Q | G | S | R | L | T | C | W | E | L | M | E | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |
| S |
|
| S | S | S | S | S | S | S | S |
| S |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |
|
| T | T | T | T |  |  |  |  | T |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
  |
  |   |
137 | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | H | V | E | S | Y | I | I | G | G | L | I | R | P | G | Y | F | S | V | G | E | S | L | A | L | E | M | I | N | A | F | S | V | E | R | A | F | I | S | C | D | A | L | S | L | E | T | G | I | T | N | A | T | M | F | E | V | G | V | K | T | R | I | I | Q | R | S | R | E | V | I | L | M | A | D | H | S | K | F | D |
Query Conservation |   |
  |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |
Alig confidence |   |
. |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |
|
| . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|   |
|
|
|   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|   |   |
| . |
| . |
|   |
|
|
|
|
|   |   |
|
|
|   |
|
|   |   |   |
|
|
|
|
|   |
|   |   |   |
|   |   |
Template Sequence |   |
. |
G | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | V | T | L | I | T | D | S | M | V | G | I | V | M | Q | K | G | M | V | D | K | V | I | V | G | A | D | R | I | V | R | D | . |
A | . |
V | F | N | K | I | G | T | Y | T | V | S | V | V | A | K | H | H | N | I | P | F | Y | V | A | A | P | K | A | T | F | D |
Template Known Secondary structure |   |
. | T |
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |
| G | G | G |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |
|
| S |  |  |  | T | T | . |  | . |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|
| G | G | G | B |
|
Template Predicted Secondary structure |   |
. |
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |
|
| . |
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
206 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
240 | |
. | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . |
  |
  |   |
217 | . | . | 220 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
. | 240 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|  |  |  |
|
|  |  |  |
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | E | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | A | V | A | T | L | S | C | I | K | T | I | I | S | D | S | G | L | . |
P | E | T | I | A | Q | R | Y | Q | R |
Query Conservation |   |
  |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
|
|   |
|
|
|
|   |   |   | . |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|   |
|
|   |   |
|
|
|   |
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |
|   |   |
Template Sequence |   |
W | E | R | T | A | K | D | V | V | I | E | E | R | P | R | E | E | L | I | F | C | G | K | R | Q | I | A | P | L | N | V | K | V | Y | N | P | A | F | D | P | T | P | L | E | N | V | T | A | L | I | T | E | Y | G | V | I | Y | P | P | Y | E | V | N | V | P | K |
Template Known Secondary structure |   |
T | T |
|
| G | G | G |
|
|
|
| B |
|
| T |  |  |  |  |  |  | T | T |  |  |
| S |
| T | T |
|
|
|
|
| B | S |  |  |  |  |  | G | G | G |
| S |  |  |  |  | T | T |  |  |  |
| S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
272 | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
  |