Return to main results Retrieve Phyre Job Id

Job DescriptionP39361
Confidence67.48%DateThu Jan 5 11:59:52 GMT 2012
Rank480Aligned Residues37
% Identity14%Templated1s7oa_
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors YlxM/p13-like
Resolution2.31

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40....
Predicted Secondary structure 





Query SS confidence 





































Query Sequence  DRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQY
Query Conservation 

   

  
     
 
 


    

  





  
Alig confidence 














.





















Template Conservation    

 

 
     
.
  


  



  

   
 
Template Sequence  DKQMNYIELYYADDY. SLAEIADEFGVSRQAVYDNIKR
Template Known Secondary structure  T

.
T

Template Predicted Secondary structure 


.



Template SS confidence 





































   25....30......... 40.........50.........60.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions