 |
Job Description | P39361 | Confidence | 70.11% | Date | Thu Jan 5 11:59:52 GMT 2012 |
Rank | 454 | Aligned Residues | 55 |
% Identity | 5% | Template | d1qzza1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Plant O-methyltransferase, N-terminal domain
|
Resolution | 2.10 |
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | L | H | Y | L | W | Q | H | R | H | L | S | T | Q | Q | A | M | E | L | F | G | Y | A | E | A | T | V | R | R | D | F | Q | Y | I | V | N | Q | Y | P | G | M | I | R | G | H | G | C | L | D | F | D | D | S | T | D | D |
Query Conservation |   |
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |   |
|
|   |   |
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
| . |   |   |
|
|   |
|   |   |
|
|
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
Template Sequence |   |
L | V | D | H | L | . |
L | A | G | A | D | T | L | A | G | L | A | D | R | T | D | T | H | P | Q | A | L | S | R | L | V | R | H | L | T | V | V | G | V | L | E | G | G | E | K | G | R | P | L | R | P | T | R | L | G | M |
Template Known Secondary structure |   |
 |  |  |  |  | . |  | T | T |
|
| S |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |
|
|
|
|
|
|
|
|  |  |
| T | T | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
41 | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|