Job Description P39361 Confidence 96.59% Date Thu Jan 5 11:59:52 GMT 2012 Rank 101 Aligned Residues 123 % Identity 16% Template c3rrlC_ PDB info PDB header:transferase Chain: C: PDB Molecule:succinyl-coa:3-ketoacid-coenzyme a transferase subunit a; PDBTitle: complex structure of 3-oxoadipate coa-transferase subunit a and b from2 helicobacter pylori 26695 Resolution 2.29 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																						.	.	.												.	.	.													.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.												.	.	.													.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	L	A	R	T	M	I	K	D	G	D	C	F	F	L	D	S	G	S	.	.	.	T	C	L	E	L	A	K	C	L	A	D	.	.	.	A	R	V	K	V	I	C	N	D	I	K	I	.	.	.	.	A	N	E	L	G	C	F	P	H	V	E	S	Y	I	I	G	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.												.	.	.													.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.												.	.	.													.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	K	A	L	S	A	L	K	D	G	D	T	I	L	V	G	G	F	G	L	C	G	I	P	E	Y	A	I	D	Y	I	Y	K	K	G	I	K	D	L	I	V	V	S	N	N	C	G	V	D	D	F	G	L	G	I	L	L	E	K	K	Q	I	K	K	I	I	A	S	Y	V	G	E	N	K	I	F	X	L	N
Template Known Secondary structure							T	T			T	T								B	T	T	B	T													T			S						S				B	T	T	B	T	T					T	T	T								S			T	T		S				T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																																					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	I	R	P	G	Y	F	S	V	G	E	S	L	A	L	E	M	I	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	V	E	R	A	F	I	S	C	D	A	L	S	L	E	T	G	I	T	N	A	T
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation												.																																																													.
Template Sequence		G	E	I	E	V	V	L	T	P	Q	.	G	T	L	A	E	N	L	H	A	G	G	A	G	I	P	A	Y	Y	T	P	T	G	V	G	T	L	I	A	Q	G	K	E	S	R	E	F	N	G	K	E	Y	I	L	E	R	A	I	T	G	D	Y	G	L	I	K	A	Y	K	S	D	.	T	L	G	N	L	V	F	R
Template Known Secondary structure		S	S	S								.													T							S	T	T	T	T	S	G	G	G	T	T	S						T	T																			S				.	T	T
Template Predicted Secondary structure												.																																																													.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	E	V	G	V	K	T	R	I	I	Q	R	S	R	E	V	I	L	M	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	A	R	N	F	N	P	L	C	A	X	A	A	K	I	C	V	A	E	V	E
Template Known Secondary structure		G	G	G		T	T							T									S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions