Job Description P39361 Confidence 96.77% Date Thu Jan 5 11:59:52 GMT 2012 Rank 96 Aligned Residues 146 % Identity 11% Template c3nzeB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator, sugar-binding family; PDBTitle: the crystal structure of a domain of a possible sugar-binding2 transcriptional regulator from arthrobacter aurescens tc1. Resolution 1.70 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.
Predicted Secondary structure																	.	.	.	.																																																									.	.
Query SS confidence																	.	.	.	.																																																									.	.
Query Sequence		Q	S	V	A	K	R	E	I	A	A	L	A	R	T	M	.	.	.	.	I	K	D	G	D	C	F	F	L	D	S	G	S	T	C	L	E	L	A	K	C	L	A	D	A	R	V	K	V	I	C	N	D	I	K	I	A	N	E	L	G	C	F	P	H	V	E	S	Y	I	I	G	G	L	I	R	.	.	P	G	Y
Query Conservation																	.	.	.	.																																																									.	.
Alig confidence																	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	E	T	L	D	R	V	A	X	Q	A	A	R	T	I	G	P	L	V	D	S	N	A	I	I	G	V	A	W	G	A	T	L	S	A	V	S	R	H	L	T	R	K	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	H	D	S	I	V	V	Q	L	N	G	A	G	N	X	Q	T	T	G
Template Known Secondary structure																		G	G	G			T	T								S								T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S							S					T	T	S		S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		F	S	V	G	E	S	L	A	L	E	M	I	N	A	F	S	V	E	R	A	F	I	S	C	D	A	L	S	L	E	T	G	I	T	N	A	T	M	F	E	V	G	V	K	T	R	I	I	Q	R	S	R	E	V	I	L	M	A	D	H	S	K	F	D	A	V	E	P	H	A	V	A	T	L	S	C	I	.	.	K
Query Conservation																																																																															.	.
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	Y	A	S	D	I	X	R	R	F	G	S	A	Y	G	A	R	V	E	Q	F	P	V	P	A	F	F	D	H	A	S	T	K	T	A	X	W	N	E	R	S	V	Q	R	I	L	D	L	Q	A	R	X	S	I	A	I	.	.	.	.	.	.	.	.	.	.	.	F	G	V	G	S	V	D	S	D	Y	P	S
Template Known Secondary structure																	T								S		S	S		S									T	T												T	T		S				.	.	.	.	.	.	.	.	.	.	.								S	S	S	T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.												.	.	210	.	.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	I	S	D	S	G	L	P	E	T	I	A	Q	R	Y	Q	R	A	G	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	Y	A	G	G	Y	L	D	E	H	D	L	T	X	L	A	A	D	D	V
Template Known Secondary structure		S			T	T	S	S	S		G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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