Job Description P39361 Confidence 79.66% Date Thu Jan 5 11:59:52 GMT 2012 Rank 375 Aligned Residues 83 % Identity 10% Template c3m1eA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional regulator benm; PDBTitle: crystal structure of benm_dbd Resolution 1.80 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		R	I	K	Q	M	L	H	Y	L	W	Q	H	R	H	L	S	T	Q	Q	A	M	E	L	F	G	Y	A	E	A	T	V	R	R	D	F	Q	Y	I	V	N	Q	Y	P	G	M	I	.	R	G	H	G	C	L	D	F	D	D	S	T	D	D	K	E	Y	V	F	D	V	K	R	T	L	Q	S	V	A	K	R	E	I
Query Conservation																																																.
Alig confidence															.	.																																.
Template Conservation															.	.
Template Sequence		R	H	L	R	Y	F	V	A	V	V	E	E	Q	.	.	S	F	T	K	A	A	D	K	L	C	I	A	Q	P	P	L	S	R	Q	I	Q	N	L	E	E	E	L	G	I	Q	L	L	E	R	G	S	R	P	V	K	T	T	P	E	G	H	F	F	Y	Q	Y	A	I	K	L	L	S	N	V	D	Q	M	V	S	M
Template Known Secondary structure														T	.	.									T	T	S																	T	S			B		T	T		S	S			B
Template Predicted Secondary structure															.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		87	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	A	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	R	I	A	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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