Return to main results Retrieve Phyre Job Id

Job DescriptionP39361
Confidence93.07%DateThu Jan 5 11:59:52 GMT 2012
Rank230Aligned Residues65
% Identity9%Templatec3lwfD_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator (np_470886.1)2 from listeria innocua at 2.06 a resolution
Resolution2.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10........ .20.........30.........40.........50...... ...60.......
Predicted Secondary structure 
...








..






Query SS confidence 















. . .





































. .










Query Sequence  QQRPDRIKQMLHYLWQ. . . HRHLSTQQAMELFGYAEATVRRDFQYIVNQYPGMIRGH. . GCLDFDDSTDD
Query Conservation   




   

  
  ...   
 
 


    

  





  

      
   ..

         
Alig confidence 















...





































..










Template Conservation 
    


  
  

        
   

    
    
 


  
  



 
 

  


 


    
Template Sequence  TTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEK
Template Known Secondary structure 
TTTS

B
T

TTS
STT

S
TTT
Template Predicted Secondary structure 






















Template SS confidence 





































































   4.....10.........20.........30.........40.........50.........60.........70...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions