Job Description P39361 Confidence 92.80% Date Thu Jan 5 11:59:52 GMT 2012 Rank 234 Aligned Residues 62 % Identity 18% Template c3la2A_ PDB info PDB header:transcription Chain: A: PDB Molecule:global nitrogen regulator; PDBTitle: crystal structure of ntca in complex with 2-oxoglutarate Resolution 2.60 Å

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.													.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	Q	Q	R	P	D	R	I	K	Q	M	L	H	Y	L	W	Q	.	.	.	.	.	.	.	.	.	.	.	.	H	R	H	L	S	T	Q	Q	A	M	E	L	F	G	Y	A	E	A	T	V	R	R	D	F	Q	Y	I	V	N	Q	Y	P	G	M	I	R	G	H	G	C	L	D	F	D	D
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation																																																														.
Template Sequence		A	H	R	D	M	G	S	R	L	V	S	F	L	L	I	L	C	R	D	F	G	V	P	C	A	D	G	I	T	I	D	L	K	L	S	H	Q	A	I	A	E	A	I	G	S	T	R	V	T	V	T	R	L	L	G	D	L	R	E	K	.	K	M	I	S	I	H	K	K	K	I	T	V	H	K
Template Known Secondary structure				S	S																					S	S	S					S												T																T	.	T	S					T	T					S
Template Predicted Secondary structure																																																														.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions