|   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | A | K | R | E | I | A | A | L | A | R | T | M | I | K | D | G | D | C | F | F | L | D | S | G | S | T | C | L | E | L | A | K | C | L | A | D | . |
. |
. |
. |
. |
A | R | V | K | V | I | C | N | D | I | K | I | A | N | E | L | G | C | F | P | H | V | E | S | Y | I | I | G | G | L | I | R | P | G | Y | F | S |
Query Conservation |   |
  |   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |
|
|
|
|
|   |
|
|
|   |   |   |
|
|   |   |
|   |   | . | . | . | . | . |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
Q | Q | L | K | K | M | A | A | L | K | A | L | E | F | V | E | D | D | M | R | L | G | I | G | S | G | S | T | V | N | E | F | I | P | L | L | G | E | R | V | A | N | G | L | R | V | T | C | V | A | T | S | Q | Y | S | E | Q | L | C | H | K | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | E | S | L | A | L | E | M | I | N | A | F | S | V | E | R | A | F | I | S | C | D | A | L | S | L | E | T | G | I | T | N | A | T | M | F | E | V | G | V | K | T | R | I | I | Q | R | S | R | E | V | I | L | M | A | D | H | S | K | F | D | A | V |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |
|
|
|
|   |
|   |
|
|   |   |
|
|
|
|
|   |   |
|   |   |   |
|
|
|
|
|   |
|
|   |
|   |   |
Template Sequence |   |
. |
. |
G | V | P | I | S | T | L | E | K | I | P | E | L | D | L | D | I | D | G | A | D | E | I | G | P | E | M | T | L | I | K | G | G | G | G | A | L | L | H | E | K | I | V | A | S | A | S | R | A | M | F | V | I | A | D | E | T | K | M | V | K | T |
Template Known Secondary structure |   |
. | . | T |
|
| B |
|
| T | T | T |
|
| S | B | S |  |  |  |  |
|
| S |  |  |
| G | G | G |
|  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  | T | B | S |
|  |  |  |  |  |  | G | G | G | B |
| S | S |
Template Predicted Secondary structure |   |
. | . |
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |