Job Description P39361 Confidence 96.58% Date Thu Jan 5 11:59:52 GMT 2012 Rank 104 Aligned Residues 144 % Identity 14% Template c3eh7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-hydroxybutyrate coa-transferase; PDBTitle: the structure of a putative 4-hydroxybutyrate coa-transferase from2 porphyromonas gingivalis w83 Resolution 2.05 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																	.												.	.	.
Query SS confidence																																	.												.	.	.
Query Sequence		L	Q	S	V	A	K	R	E	I	A	A	L	A	R	T	M	I	K	D	G	D	C	F	F	L	D	S	G	S	T	C	.	L	E	L	A	K	C	L	A	D	A	R	.	.	.	V	K	V	I	C	N	D	I	K	I	A	N	E	L	G	C	F	P	H	V	E	S	Y	I	I	G	G	L	I	R	P	G	Y	F
Query Conservation																																	.												.	.	.
Alig confidence																																	.												.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	Y	A	S	R	I	V	S	A	E	E	A	V	K	H	I	K	N	G	E	R	V	A	L	S	H	A	A	G	V	P	Q	S	C	V	D	A	L	V	Q	Q	A	D	L	F	V	E	I	Y	H	X	L	C	L	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	A	D	F	I	P	V
Template Known Secondary structure		G	G	G	G	G	G									T	T			T	T								G	G	G												S	T	T	T								B		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																.	.	.	.	.	.	.	70
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	G	E	S	L	A	L	E	M	I	N	A	F	S	V	E	R	A	F	I	S	C	D	A	L	S	L	E	T	G	I	T	N	A	T	M	F	E	V	G	V	K	T	R	I	I	Q	R	S	R	E	V	I	L	M	A	D	H	S	K	F	D	A	V	E	P	H	A	V	A	T	L	S	C	I	K	T	I	I
Query Conservation
Alig confidence																													.											.																				.
Template Conservation																													.											.																				.
Template Sequence		F	F	Y	E	V	P	S	X	I	R	K	D	I	L	H	I	D	V	A	I	V	Q	L	S	X	P	D	.	E	N	G	Y	C	S	F	G	V	S	.	C	D	Y	S	K	P	A	A	E	S	A	H	L	V	I	G	E	I	N	.	R	Q	X	P	Y	V	H	G	D	N	L	I	H	I	S	K	L	D	Y	I	V
Template Known Secondary structure			G	G	G							T	T	S	S			S											.	T	T	S					T	T	B	.		T	T									S								.	T	T	S						S					G	G	G		S
Template Predicted Secondary structure																													.											.																				.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		234	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	S	G	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	A	D	Y	P	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions