 |
Job Description | P39361 | Confidence | 97.46% | Date | Thu Jan 5 11:59:52 GMT 2012 |
Rank | 45 | Aligned Residues | 58 |
% Identity | 12% | Template | c3eetA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:putative gntr-family transcriptional regulator; |
PDBTitle: crystal structure of putative gntr-family transcriptional2 regulator
|
Resolution | 1.97 Å |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|  | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | K | Q | M | L | H | Y | L | W | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
H | R | H | L | . |
S | T | Q | Q | A | M | E | L | F | G | Y | A | E | A | T | V | R | R | D | F | Q | Y | I | V | N | Q | Y | P | G | M | I | R | G | H | G | C | L | D | F | D | D | S | T |
Query Conservation |   |
|   |   |   |
|
|   |   |
|   |   | . | . | . | . | . | . | . | . | . |   |   |   |
| . |   |
|   |
|
|
|   |   |   |   |
|
|   |   |
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |
|
|
|
|
|
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |
|
|
|
|   |   |   |   |
|
|   |
|   |   |   |   |   |   |
Template Sequence |   |
A | Y | L | R | V | A | G | D | L | R | K | K | I | V | D | G | S | L | P | P | H | T | R | L | P | S | Q | A | R | I | R | E | E | Y | G | V | S | D | T | V | A | L | E | A | R | K | V | L | X | A | E | G | L | V | E | G | R | S | G | T | Y | V | R | E | R | P | V | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
| T | T | S | B |
|
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|