Job Description P39361 Confidence 97.65% Date Thu Jan 5 11:59:52 GMT 2012 Rank 38 Aligned Residues 148 % Identity 22% Template c3ecsD_ PDB info PDB header:translation Chain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha Resolution 2.65 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.			.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																			.									.	.								.	.	.	.	.	.	.
Query SS confidence																																			.									.	.								.	.	.	.	.	.	.
Query Sequence		R	T	L	Q	S	V	A	K	R	E	I	A	A	L	A	R	T	M	I	K	D	G	D	C	F	F	L	D	S	G	S	T	C	.	L	E	L	A	K	C	L	A	.	.	D	A	R	V	K	V	I	.	.	.	.	.	.	.	C	N	D	I	K	I	A	N	E	L	G	C	F	P	H	V	E	S	Y	I	I	G
Query Conservation																																			.									.	.								.	.	.	.	.	.	.
Alig confidence																																			.									.	.								.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		L	R	R	I	S	L	S	R	N	K	I	A	D	L	C	H	T	F	I	K	D	G	A	T	I	L	T	H	A	Y	S	R	V	V	L	R	V	L	E	A	A	V	A	A	K	K	R	F	S	V	Y	V	T	E	S	Q	P	D	L	S	G	K	K	X	A	K	A	L	C	H	L	N	V	P	V	T	.	.	.	.
Template Known Secondary structure																		T	T			T	T							S															T	T											T	T	T	T											T	T	T					.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		G	L	I	R	P	G	Y	F	S	V	G	E	S	L	A	L	E	M	I	N	A	F	S	V	E	R	A	F	I	S	C	D	A	L	S	L	E	T	G	I	T	N	A	T	M	F	E	V	G	V	K	T	R	I	I	Q	R	S	R	E	V	I	L	M	A	D	H	S	K	F	D	A	V	E	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.													.																							.																														.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.													.																							.
Template Sequence		.	.	.	.	.	.	.	.	.	V	V	L	D	A	A	V	G	Y	I	X	E	.	K	A	D	L	V	I	V	G	A	E	G	V	V	E	N	G	G	I	I	N	K	I	.	G	T	N	Q	X	A	V	C	A	K	A	Q	N	K	P	F	Y	V	V	A	E	S	F	K	F	V	R	L	F	P	L	N	Q	Q	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.				G	G	G					G	G	.	G		S							S				T	T	S						T	.	T											T	T									G	G	G	B		S				S	S	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.													.																							.
Template SS confidence
											177	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
																					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	A	V	A	T	L	S	C	I	K	T	I	I	S	D	S	G	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	D	K	F	K	Y	K	A	D	G	Q	D	L	K	E	E	H	P	W	V	D	Y	T	A	P	S	L	I	T	L	L	F	T	D	L	G	V
Template Known Secondary structure		S						S	S					S							S						G	G	G		S					T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions