Job Description P39361 Confidence 97.87% Date Thu Jan 5 11:59:52 GMT 2012 Rank 26 Aligned Residues 145 % Identity 17% Template c3cdkD_ PDB info PDB header:transferase Chain: D: PDB Molecule:succinyl-coa:3-ketoacid-coenzyme a transferase PDBTitle: crystal structure of the co-expressed succinyl-coa2 transferase a and b complex from bacillus subtilis Resolution 2.59 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																									.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	A	K	R	E	I	A	A	L	A	R	T	M	I	K	D	G	D	C	F	F	L	D	S	G	S	T	C	L	E	L	A	K	C	L	A	D	A	.	R	V	K	V	I	C	N	D	I	K	I	A	N	E	L	G	C	F	P	H	V	E	S	Y	I	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.													.							.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	A	R	K	R	M	V	K	R	A	V	Q	E	I	K	D	G	M	N	V	N	L	G	I	G	.	M	P	T	L	V	A	N	E	I	P	D	G	V	H	V	M	L	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	E	N	G	L	L	G	I	G	P	Y	P	L	E	G	T	E	D	A	D	L	I	N
Template Known Secondary structure														T	T			T	T							T	T	.	G	G	G	G	G	G	G	G			T	T								.	.	.	.	.	.	.	.	.	.	.	.	T	T	T										T	T				T	T		B
Template Predicted Secondary structure																												.																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.													.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
							146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																									.	.	.	.																														.	.
Query SS confidence		.	.	.	.	.																																									.	.	.	.																														.	.
Query Sequence		.	.	.	.	.	G	L	I	R	P	G	Y	F	S	V	G	E	S	L	A	L	E	M	I	N	A	F	S	V	E	R	A	F	I	S	C	D	A	L	S	L	E	T	G	I	.	.	.	.	T	N	A	T	M	F	E	V	G	V	K	T	R	I	I	Q	R	S	R	E	V	I	L	M	A	D	H	S	K	.	.
Query Conservation		.	.	.	.	.																																									.	.	.	.																														.	.
Alig confidence		.	.	.	.	.																																									.	.	.	.																														.	.
Template Conservation
Template Sequence		A	G	K	E	T	I	T	E	V	T	G	A	S	Y	F	D	S	A	E	S	F	A	M	I	R	G	G	H	I	D	L	A	I	L	G	G	M	E	V	S	E	Q	G	D	L	A	N	W	M	I	P	G	M	V	K	G	M	G	G	A	M	D	L	V	N	G	A	K	R	I	V	V	I	M	E	H	V	N	S	K
Template Known Secondary structure		T	T	S		B																					T	T										S				T	T						S										T	T									S	S							S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	A	V	E	P	H	A	V	A	T	L	S	C	I	K	T	I	I	S	D	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	K	T	C	S	L	P	L	T	G	Q	K	V	V	H	R	L	I	T	D	L	A
Template Known Secondary structure		B		S	S			S			S	B	S	S			S					S	S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions