Job Description P39361 Confidence 97.43% Date Thu Jan 5 11:59:52 GMT 2012 Rank 47 Aligned Residues 88 % Identity 13% Template c3by6C_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:predicted transcriptional regulator; PDBTitle: crystal structure of a transcriptional regulator from oenococcus oeni Resolution 2.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20						.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.			.
Query SS confidence																	.	.	.	.	.			.
Query Sequence		P	D	R	I	K	Q	M	L	H	Y	L	W	Q	H	R	.	.	.	.	.	H	L	.	S	T	Q	Q	A	M	E	L	F	G	Y	A	E	A	T	V	R	R	D	F	Q	Y	I	V	N	Q	Y	P	G	M	I	R	G	H	G	C	L	D	F	D	D	S	T	D	D	K	E	Y	V	F	D	V	K	R	T	L	Q
Query Conservation																	.	.	.	.	.			.
Alig confidence																	.	.	.	.	.			.																																															.	.
Template Conservation																																																																							.	.
Template Sequence		L	Q	L	V	D	R	I	K	N	E	V	A	T	D	V	L	S	A	N	D	Q	L	P	S	V	R	E	T	A	L	Q	E	K	I	N	P	N	T	V	A	K	A	Y	K	E	L	E	A	Q	K	V	I	R	T	I	P	G	K	G	T	F	I	T	G	N	T	A	S	V	.	.	K	N	S	N	Q	N	R	L	L
Template Known Secondary structure														T	T	S	S		T	T		B												T																T	T	S					T	T	T						S						.	.
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	A	K	R	E	I	A	A	L	A	R	T	M	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	L	S	Q	V	I	A	E	L	I	K	S	G	V	K
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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