Job Description P39361 Confidence 97.85% Date Thu Jan 5 11:59:52 GMT 2012 Rank 28 Aligned Residues 141 % Identity 16% Template c3a11D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:translation initiation factor eif-2b, delta PDBTitle: crystal structure of ribose-1,5-bisphosphate isomerase from2 thermococcus kodakaraensis kod1 Resolution 2.50 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	L	Q	S	V	A	K	R	E	I	A	A	L	A	R	T	M	I	K	D	G	D	C	F	F	L	D	S	G	S	T	C	L	E	L	A	K	C	L	A	D	A	R	V	K	V	I	C	N	D	I	K	I	A	N	E	L	G	C	F	P	H	V	E	S	Y	I	I	G	G	L	I	R	P	G	Y	F	S	V
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		I	H	N	S	E	K	A	L	E	R	I	G	E	F	G	A	K	R	I	E	D	G	D	V	I	M	T	H	C	H	S	K	A	A	I	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	T	A	W	E	Q	G	K	D	I	K	V	I	V	T	.	.	.	.	.	E	T	R	P	K	W
Template Known Secondary structure							T											T	T			T	T							S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T									.	.	.	.	.			T	T	T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.																		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	S	L	A	L	E	M	I	N	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	E	R	A	F	I	S	C	D	A	L	S	L	E	T	G	I	T	N	A	T	M	F	E	V	G	V	K	T	R	I	I	Q	R	S	R	E	V	I	L	M	A	D	H	S	K	F	D	A	V
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																																					.
Template Sequence		Q	G	K	I	T	A	K	E	L	A	S	Y	G	I	P	V	I	Y	V	V	D	S	A	A	R	H	Y	M	K	M	T	D	K	V	V	M	G	A	D	S	I	T	V	N	G	A	V	I	N	K	I	.	G	T	A	L	I	A	L	T	A	K	E	H	R	V	W	T	M	I	A	A	E	T	Y	K	F	H	P	E
Template Known Secondary structure													T	T								G	G	G	T	T	T	T	G	G	G		S							S				T	T							T	.	T											T	T									G	G	G	B		S	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		219																																	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	A	V	A	T	L	S	C	I	K	T	I	I	S	D	S	G	L
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	M	L	G	Q	L	V	E	M	R	D	P	T	E	V	I	P	E	D	E	L	K	T	W	P	K	N	I	E	V	W	N	P	A	F	D	V	T	P	P	E	Y	V	D	V	I	I	T	E	R	G	I
Template Known Secondary structure				T	T	T	T			B			G	G	G	T	S						T	T	S		S	S						B	S						G	G	G		S					T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions