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Job DescriptionP39361
Confidence98.56%DateThu Jan 5 11:59:52 GMT 2012
Rank19Aligned Residues207
% Identity17%Templatec2w48D_
PDB info PDB header:transcriptionChain: D: PDB Molecule:sorbitol operon regulator; PDBTitle: crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  PDRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQYIVNQYPGMIRGHGCLDFDDSTDDKEYVFDVKRTLQSVAKRE
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Template Sequence  DIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTIA. . . . . . . . . . . . . INYDYNENLWLEQQLKQK
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . IAALARTM. . . . IKDGDCFFLDSGSTCLELAKCLADARVKVICNDIKIANELGCFPHV
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Template Sequence  FGLKEAVVASSDGLLEEEQLSAMGQHGALLVDRLLEPGDIIGFSWGRAVRSLVENLPQRS. . . . . . . . . . . . . . . QSRQV
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   73......80.........90.........100.........110.........120.........130.. .....
 
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Query Sequence  ESYIIGGLIRPGYFSVGE. . SLALEMINAFSVERAFISCDALSLETGITNATMFEVGVKTRIIQRSREVILMADHSKFDA
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Template Sequence  ICVPIIGGPSGKLESRYHVNTLTYGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVA. . . . . . . . .
Template Known Secondary structure  SB
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   138.140.........150.........160.........170.........180.........190.........200........
 
   218.220.........230.........240.........250.
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Query Sequence  VEPHAVATLSCIKTIISDSGLPETIAQRYQRAGC
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Template Sequence  . . LVGIGSPAIRDGANWHAFYGSEESDDLNARHV
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   209210.........220.........230.........240
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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