Job Description P39361 Confidence 89.88% Date Thu Jan 5 11:59:52 GMT 2012 Rank 265 Aligned Residues 173 % Identity 13% Template c2hj0A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative citrate lyase, alfa subunit; PDBTitle: crystal structure of the putative alfa subunit of citrate lyase in2 complex with citrate from streptococcus mutans, northeast structural3 genomics target smr12 (casp target). Resolution 2.70 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.							.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																								.	.	.	.	.	.											.																			.	.
Query SS confidence																.	.	.	.	.	.																								.	.	.	.	.	.											.																			.	.
Query Sequence		V	A	K	R	E	I	A	A	L	A	R	T	M	I	.	.	.	.	.	.	K	D	G	D	C	F	F	L	D	S	G	S	T	C	L	E	L	A	K	C	L	A	D	.	.	.	.	.	.	A	R	V	K	V	I	C	N	D	I	.	K	I	A	N	E	L	G	C	F	P	H	V	E	S	Y	I	I	G	.	.
Query Conservation																.	.	.	.	.	.																								.	.	.	.	.	.											.																			.	.
Alig confidence																.	.	.	.	.	.																								.	.	.	.	.	.											.																			.	.
Template Conservation
Template Sequence		P	K	E	L	L	I	A	E	Y	A	A	K	V	I	T	S	S	P	Y	Y	K	E	G	F	S	F	Q	T	G	T	G	G	A	S	L	A	V	T	R	F	X	R	E	Q	X	I	K	D	D	I	K	A	N	F	A	L	G	G	I	T	N	A	X	V	E	L	L	E	E	G	L	V	D	K	I	L	D	V	Q	D
Template Known Secondary structure																	T	S	T	T		S	T	T							S	S																	S									S												T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
											146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																								.	.	.	.																												.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																								.	.	.	.																												.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	G	L	I	R	P	G	Y	F	S	V	G	E	S	L	A	L	E	M	I	N	A	F	S	.	.	.	.	V	E	R	A	F	I	S	C	D	A	L	S	L	E	T	G	I	T	N	A	T	M	F	E	V	G	V	.	.	.	.	.	.	K	T	R	I	I	Q	R	S	R	E	V
Query Conservation		.	.	.	.	.	.	.	.	.																								.	.	.	.																												.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																								.	.	.	.																												.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	H	P	S	A	V	S	L	D	R	N	A	E	K	H	Y	E	I	D	A	N	X	Y	A	S	P	L	S	K	G	S	V	I	N	Q	L	D	I	C	V	L	S	A	L	E	V	D	T	N	F	N	V	N	V	X	T	G	S	D	G	V	I	R	G	A	S	G	G	H	C	D	T	A	F	A	A	K	X	S
Template Known Secondary structure		S	S										T	T	T	T												S	S	S	S			G	G	G	G		S							S				T	T						S	B		T	T			B			B		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		207	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence										.	.	.	.	.	.																										.	.	.	.	.
Query Sequence		I	L	M	A	D	H	S	K	.	.	.	.	.	.	F	D	A	V	E	P	H	A	V	A	T	L	S	C	I	K	T	I	I	S	D	S	G	L	P	.	.	.	.	.	E	T	I	A	Q	R	Y	Q	R	A	G	C	Q	L	F
Query Conservation										.	.	.	.	.	.																										.	.	.	.	.
Alig confidence										.	.	.	.	.	.							.																			.	.	.	.	.
Template Conservation																						.
Template Sequence		L	V	I	S	P	L	V	R	G	R	I	P	T	F	V	D	K	V	N	T	.	V	I	T	P	G	T	S	V	D	V	V	V	T	E	V	G	I	A	I	N	P	N	R	P	D	L	I	E	Y	F	K	D	L	K	V	P	Q	L
Template Known Secondary structure							S			T	T			S	B		S	S		S	S	.		S	B		G	G	G							S	S						T	T								T	T	T		S	S
Template Predicted Secondary structure																						.
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430		.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions