Job Description P39361 Confidence 97.54% Date Thu Jan 5 11:59:52 GMT 2012 Rank 40 Aligned Residues 81 % Identity 11% Template c2e1cA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex Resolution 2.10 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	M	L	H	Y	L	W	Q	H	R	H	L	S	T	Q	Q	A	M	E	L	F	G	Y	A	E	A	T	V	R	R	D	F	Q	Y	I	V	N	Q	Y	P	G	M	I	R	G	H	G	C	L	D	F	D	D	S	T	D	D	K	E	Y	V	F	D	V	K	R	T	L	Q	S	V	A	K	R	E	I	A	A	L
Query Conservation
Alig confidence																																													.	.	.
Template Conservation																																													.	.	.
Template Sequence		K	K	I	I	K	I	L	Q	N	D	G	K	A	P	L	R	E	I	S	K	I	T	G	L	A	E	S	T	I	H	E	R	I	R	K	L	R	E	S	G	V	I	K	.	.	.	K	F	T	A	I	I	D	P	E	A	L	G	Y	S	M	L	A	F	I	L	V	K	V	K	A	G	K	Y	S	E	V	A	S	N
Template Known Secondary structure												T	T											T	S															T	T	S	S		.	.	.								G	G	G	G	T													T	T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	T	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	K	Y
Template Known Secondary structure				T	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions