Job Description P39361 Confidence 96.53% Date Thu Jan 5 11:59:52 GMT 2012 Rank 105 Aligned Residues 97 % Identity 15% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		Q	R	P	D	R	I	K	Q	M	L	H	Y	L	W	Q	H	R	.	.	H	L	S	T	Q	Q	A	M	E	L	F	G	Y	A	E	A	T	V	R	R	D	F	Q	Y	I	V	N	Q	Y	P	G	M	I	R	G	H	G	C	L	D	F	D	D	S	T	D	D	K	E	Y	V	F	D	V	K	R	T	L	Q	S	V
Query Conservation																			.	.
Alig confidence																			.	.																														.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	L	I	T	Y	L	R	I	L	E	E	L	E	A	Q	G	V	H	R	T	S	S	E	Q	L	G	G	L	A	Q	V	T	A	F	Q	V	R	K	D	L	S	Y	F	G	S	Y	G	.	.	T	R	G	V	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	P
Template Known Secondary structure																	T	T														T	S												T	T				.	.		T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.																						.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		A	K	R	E	I	A	A	L	A	R	T	M	I	K	D	G	D	C	F	F	L	D	S	G	S	T	C	L	E	L	A	K	C	L	A	.	D	A	R	V	K	V	I
Query Conservation																																					.
Alig confidence																																					.
Template Conservation
Template Sequence		V	L	K	R	E	L	R	H	I	L	G	L	N	R	K	W	G	L	C	I	V	G	M	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	S	F	E	L	R
Template Known Secondary structure												T	T	T	S										S										S				S	S
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions