Return to main results Retrieve Phyre Job Id

Job DescriptionP39361
Confidence99.80%DateThu Jan 5 11:59:52 GMT 2012
Rank12Aligned Residues121
% Identity20%Templatec1uj6A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: crystal structure of thermus thermophilus ribose-5-phosphate isomerase2 complexed with arabinose-5-phosphate
Resolution1.74 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  VAKREIAALARTMIKDGDCFFLDSGSTCLELAKCLADARVKVICNDIKIANELGCFPHVESYIIGGLIRPGYFSVGESLA
Query Conservation    
  

  
  

  
 




 


   

  
    







 

  
       

  

          
  
Alig confidence 


































..............






























Template Conservation    
  

  
   
 

  








   
  
..............
       
  
  
  
  
       

 
Template Sequence  SYKKEAAHAAIAYVQDGXVVGLGTGSTARYAVLEL. . . . . . . . . . . . . . ARRLREGELKGVVGVPTSRATEELAKREGIP
Template Known Secondary structure  TT

TT


S..............TTSS
S
SSTT

Template Predicted Secondary structure 







..............










Template SS confidence 















































































   7..10.........20.........30.........40. ........50.........60.........70..
 
   161........170.........180.........190.........200.........210.....
Predicted Secondary structure 

























Query SS confidence 






















































Query Sequence  LEMINAFSVERAFISCDALSLETGITNATMFEVGVKTRIIQRSREVILMADHSKF
Query Conservation     
     
 



  

    
 
      
  
      
   


 
 

 
Alig confidence 






















































Template Conservation 
  
    








 

    



 
 

  

 

  
   




 

 
Template Sequence  LVDLPPEGVDLAIDGADEIAPGLALIKGXGGALLREKIVERVAKEFIVIADHTKK
Template Known Secondary structure  B



TT


SGGG

TTS
TGGGB
Template Predicted Secondary structure 




















Template SS confidence 






















































   73......80.........90.........100.........110.........120.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions