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Job DescriptionQ46809
Confidence97.44%DateThu Jan 5 12:34:36 GMT 2012
Rank39Aligned Residues165
% Identity13%Templatec3kjgB_
PDB info PDB header:hydrolase, metal binding proteinChain: B: PDB Molecule:co dehydrogenase/acetyl-coa synthase complex, accessory PDBTitle: adp-bound state of cooc1
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23.... ..30.........40.........50. ........60.........70.........80..
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Query Sequence  ISVVG. . AGGKTSLLFWLAELLQASGRRVLI. . . . . . . TTTTHMFMPTSHWPVVFCRDPAMLPHASLTS. . . . . . . . . . .
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Template Sequence  LAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPDSCLGQTLGLSIEEAYAITPLIEMKDEIREKTGDGGLLILNPKV
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TTS
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   83......90.........100.........110.. .......120.........130.........140.....
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Query Sequence  . . . . . . . . . . . PISFCFHSWKANQGKVQGFTPEAIDALVQR. . . . . . PECDVILIEADGSRGMPLKAPDEHEPCIPKSSC
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Template Sequence  DGDLDKYGRYIDDKIFLIRMGEIKKGGSQCYCRENSFLGSVVSALFLDKKEAVVMDMGAG. . . . . . . IEHLTRGTAKAVD
Template Known Secondary structure  GGGGGGSSSSSS





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   83......90.........100.........110.........120.........130.........140.. .......150.....
 
   146...150.........160.........170.........180.........190.........200.........210.........220.....
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Query Sequence  CVIAVMGGHTLGAKVSTENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQS
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Template Sequence  MMIAVIEPN. . . . . . . LNSIKTGLNIEKLAGDL. . . . . . . . . . . . . . . . . . . . . . . . . GIKKVRYVINKVRNIKEEKLIK
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   156...160.... .....170.........180. ........190.........200...
 
   226
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Query Sequence  E
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Template Sequence  K
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   204
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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