Job Description Q46809 Confidence 97.48% Date Thu Jan 5 12:34:36 GMT 2012 Rank 35 Aligned Residues 127 % Identity 13% Template c3fkqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ntrc-like two-domain protein; PDBTitle: crystal structure of ntrc-like two-domain protein (rer070207001320)2 from eubacterium rectale at 2.10 a resolution Resolution 2.10 Å

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		16	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure														.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	K	R	P	T	V	I	S	V	V	G	.	.	.	A	G	G	K	T	S	L	L	F	W	L	A	E	L	L	Q	A	S	G	R	R	V	L	I	T	T	T	T	H	M	F	M	P	T	S	H	W	P	V	V	F	C	R	D	P	A	M	L	P	H	A	S	L	T	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.																									.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		E	N	D	K	S	S	V	V	I	F	T	S	P	C	G	G	V	G	T	S	T	V	A	A	A	C	A	I	A	H	A	N	X	G	K	K	V	F	Y	.	.	.	.	.	L	N	I	E	Q	C	G	T	T	D	V	F	F	Q	A	E	G	N	A	T	X	S	D	V	I	Y	S	L	K	S	R	K	A	N	L	L
Template Known Secondary structure			T	T	S									S	S	T	T	S	S																T						.	.	.	.	.					T	T										S		S												S			S
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
											82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	S	P	I	S	F	C	F	H	S	W	K	A	N	Q	G	K	V	Q	G	F	T	P	E	.	.	.	.	A	I	D	A	L	V	Q	R	P	E	C	D	V	I	L	I	E	A	D	G	S	R	G	M	P	L	K	A	P	D	E	H	E	P	C	I	P	K	S	S	C	C	V	I
Query Conservation		.	.	.	.	.	.	.	.	.																								.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																								.	.	.	.																													.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.
Template Sequence		L	K	L	E	S	C	I	K	Q	S	Q	E	G	V	S	Y	F	S	S	T	K	V	A	L	D	I	L	E	I	S	Y	A	D	I	D	T	L	I	G	N	I	Q	G	X	D	N	Y	D	E	I	I	V	D	L	P	F	S	L	E	I	E	K	L	K	.	.	.	.	.	.	.	L	L	S	K	A	W	R	I	I
Template Known Secondary structure							T					T	T	S								S	S	G	G	G	G	G	G																T	S			S																	.	.	.	.	.	.	.			T	T		S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.								.	260	.	.	.	.	.	.	.
		149	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	M	G	G	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	N	D	G	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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