Job Description Q46809 Confidence 98.66% Date Thu Jan 5 12:34:36 GMT 2012 Rank 6 Aligned Residues 109 % Identity 26% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		D	P	S	A	L	V	I	D	L	G	A	Q	K	R	P	T	V	I	S	V	V	G	.	.	A	G	G	K	T	S	L	L	F	W	L	A	E	L	L	Q	A	S	G	R	R	V	L	I	T	T	T	T	H	M	F	M	P	T	S	H	W	P	V	V	F	C	R	D	P	A	M	L	P	H	A	S	L	T	S	P
Query Conservation																								.	.
Alig confidence																								.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	I	D	L	I	E	E	I	R	K	A	E	K	P	Y	V	I	M	F	V	G	F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	K	N	H	G	F	S	V	V	I	A	A	S	D	T	F	.	.	.	.	.	.	.	.	.	.	.	.	R	A	G	A	I	E	Q	L	E	E	H	A	K	R
Template Known Secondary structure												T	S		S										T	T	S	S															T	T										T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.													.	.	.	.	.	.	.	170	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	F	C	F	H	S	W	K	A	N	Q	G	K	V	Q	G	F	T	P	E	A	I	D	A	L	V	Q	R	P	E	C	D	V	I	L	I	E	A	D	G	S	R	G	M
Query Conservation
Alig confidence									.																						.
Template Conservation									.																						.
Template Sequence		I	G	V	K	V	I	K	.	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I	Q	H	A	K	A	R	.	G	I	D	V	V	L	I	D	T	A	G	R	S	E	T
Template Known Secondary structure		T	T						.		S	T	T																		.	T		S								S	S			S
Template Predicted Secondary structure									.																						.
Template SS confidence
		177	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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