Job Description Q46809 Confidence 98.71% Date Thu Jan 5 12:34:36 GMT 2012 Rank 3 Aligned Residues 110 % Identity 21% Template c3dm5A_ PDB info PDB header:rna binding protein, transport protein Chain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus. Resolution 2.51 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		S	I	V	D	P	S	A	L	V	I	D	L	G	A	Q	K	R	P	T	V	I	S	V	V	G	.	.	A	G	G	K	T	S	L	L	F	W	L	A	E	L	L	Q	A	S	G	R	R	V	L	I	T	T	T	T	H	M	F	M	P	T	S	H	W	P	V	V	F	C	R	D	P	A	M	L	P	H	A	S	L
Query Conservation																											.	.
Alig confidence														.	.												.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	F	L	G	T	E	A	K	P	I	E	I	.	.	K	E	K	P	T	I	L	L	M	V	G	I	Q	G	S	G	K	T	T	T	V	A	K	L	A	R	Y	F	Q	K	R	G	Y	K	V	G	V	V	C	S	.	.	.	.	.	.	.	.	.	.	.	.	D	T	W	R	P	G	A	Y	H	Q	L	R	Q	L
Template Known Secondary structure				T	T	S	S							.	.		S	S	S									T	T	S	S														T	T	T									.	.	.	.	.	.	.	.	.	.	.	.			S	S	T
Template Predicted Secondary structure														.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.													.	.	.	140	.	.	.	.	.	.	.	.	.	150
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	P	I	S	F	C	F	H	S	W	K	A	N	Q	G	K	V	Q	G	F	T	P	E	A	I	D	A	L	V	Q	R	P	E	C	D	V	I	L	I	E	A	D	G	S	R	G	M
Query Conservation
Alig confidence													.																					.
Template Conservation													.																					.
Template Sequence		L	D	R	Y	H	I	E	V	F	G	N	.	P	Q	E	K	D	A	I	K	L	A	K	E	G	V	D	Y	F	K	S	K	.	G	V	D	I	I	I	V	D	T	A	G	R	H	K	E
Template Known Secondary structure			G	G	G	T							.	T	T																		T	.	T		S										S	S
Template Predicted Secondary structure													.																					.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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