Job Description Q46809 Confidence 97.36% Date Thu Jan 5 12:34:36 GMT 2012 Rank 41 Aligned Residues 167 % Identity 13% Template c2wsmB_ PDB info PDB header:metal binding protein Chain: B: PDB Molecule:hydrogenase expression/formation protein (hypb); PDBTitle: crystal structure of hydrogenase maturation factor hypb from2 archaeoglobus fulgidus Resolution 2.30 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		A	L	V	I	D	L	G	A	Q	K	R	P	T	V	I	S	V	V	G	.	.	A	G	G	K	T	S	L	L	F	W	L	A	E	L	L	Q	A	S	G	R	R	V	L	I	T	T	T	T	H	M	F	M	P	T	S	H	W	P	V	V	F	C	R	D	P	A	M	L	P	H	A	S	L	T	S	P	I	S	F
Query Conservation																					.	.
Alig confidence																					.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	N	R	E	A	L	R	E	S	G	T	V	A	V	N	I	M	G	A	I	G	S	G	K	T	L	L	I	E	R	T	I	E	R	I	G	N	E	V	K	I	G	A	M	L	G	D	A	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T										T	T	S														T	T	T	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F	H	S	W	K	A	N	Q	G	K	V	Q	G	F	T	P	E	A	I	D	A	L	V	Q	R	P	E	C	D	V	I	L	I	E	A	D	G	S	R	G	M	P	L	K	A	P	D	E	H	E	P	C	I	P	K	S	S	C	C	V	I	A	V	M	G	G	H	T	L	G	A	K	V	S	T	E	N	V	H
Query Conservation
Alig confidence		.	.	.	.	.																																			.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																			.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	I	S	T	G	K	E	C	H	L	D	A	H	M	I	Y	H	R	L	K	K	F	S	D	C	D	L	L	L	I	E	N	V	G	N	.	.	.	.	.	.	.	.	L	I	C	P	V	D	F	D	L	G	E	N	Y	R	V	V	M	V	S	V	T	.	.	.	.	.	.	.	E	G	D	D	V
Template Known Secondary structure		.	.	.	.	.				T	T		S	S										T	G	G	G	T	T		S										.	.	.	.	.	.	.	.	S	S	G	G	G	G				S		S								G	G	.	.	.	.	.	.	.	G		T	T
Template Predicted Secondary structure		.	.	.	.	.																																			.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
							86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.									120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140								.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.
Predicted Secondary structure																																																										.																.
Query SS confidence																																																										.																.
Query Sequence		R	W	S	Q	F	A	D	I	T	G	L	T	P	D	A	T	L	Q	L	S	D	L	V	A	L	V	R	H	P	Q	G	A	F	K	N	V	P	Q	G	C	R	R	V	W	F	I	N	R	F	S	Q	C	E	N	A	I	.	A	Q	S	E	L	L	Q	P	L	Q	Q	H	D	V	E	.	A	I	W	L	G	D	I
Query Conservation																																																										.																.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	K	H	P	E	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	A	D	L	I	V	I	N	K	V	A	L	A	E	A	V	G	A	D	V	E	K	M	K	A	D	A	K	L	I	N	P	R	A	K	I	I	E	M	D	L
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S							G	G	G					T															T	T	S						B	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.																															.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	H	P	A	I	A	R	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	G	K	G	F	E	E	W	I
Template Known Secondary structure		T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions