Return to main results Retrieve Phyre Job Id

Job DescriptionQ46809
Confidence95.08%DateThu Jan 5 12:34:36 GMT 2012
Rank115Aligned Residues32
% Identity28%Templatec2w0sB_
PDB info PDB header:transferaseChain: B: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of vaccinia virus thymidylate kinase2 bound to brivudin-5'-monophosphate
Resolution2.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920....... ..30.........40.........50
Predicted Secondary structure 



..






Query SS confidence 








. .






















Query Sequence  RPTVISVVG. . AGGKTSLLFWLAELLQASGRRVL
Query Conservation     





..







  

 
    
  

Alig confidence 








..






















Template Conservation 

 

 
 
  






   
   
        
Template Sequence  RGALIVFEGLDKSGKTTQCMNIMESIPANTIKYL
Template Known Secondary structure 


STTS
S
TTS
Template Predicted Secondary structure 











Template SS confidence 

































   3......10.........20.........30......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions