Return to main results Retrieve Phyre Job Id

Job DescriptionQ46809
Confidence98.56%DateThu Jan 5 12:34:36 GMT 2012
Rank13Aligned Residues127
% Identity21%Templatec2qy9A_
PDB info PDB header:protein transportChain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20....... ..30.........40.........50.........60.........70.........80.........90..
Predicted Secondary structure 







..



























Query SS confidence 












. .
































































Query Sequence  GAQKRPTVISVVG. . AGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWK
Query Conservation   
 
   





..







  

 
    
  






 
  
                         
      
Alig confidence 












..























.....







.......



















.
Template Conservation         

  

  
 




 



      
  
 
.....
  
  
 ....... 
  

   
    
     .
Template Sequence  VEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVML. . . . . AAGDTFRA. . . . . . . AAVEQLQVWGQRNNIPVIAQ.
Template Known Secondary structure 

S
TT

TTS
TTT

.....


TT
.......TT



.
Template Predicted Secondary structure 















.....




.......



.
Template SS confidence 















































































   288.290.........300.........310.........320...... ...330.... .....340.........350....
 
   93......100.........110.........120.........130 .........140.........150.....
Predicted Secondary structure 





















.......















Query SS confidence 





































. . . . . . .
























Query Sequence  ANQGKVQGFTPEAIDALVQRPECDVILIEADGSRGMPL. . . . . . . KAPDEHEPCIPKSSCCVIAVMGGHT
Query Conservation     


 

       
      
 








  

.......


   




  
  

 
 
   
Alig confidence 



















.
















.......
























Template Conservation              
       .  
 







      
  

  
           
    


 
  
Template Sequence  HTGADSASVIFDAIQAAKAR. NIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDAST
Template Known Secondary structure  STT

T.T
S




GGGTTT
TT

SGGG
Template Predicted Secondary structure 





.




















Template SS confidence 





































































   355....360.........370.... .....380.........390.........400.........410.........420...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions