Job Description Q46809 Confidence 98.28% Date Thu Jan 5 12:34:36 GMT 2012 Rank 18 Aligned Residues 100 % Identity 21% Template c2j289_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs Resolution 8.0 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure															.	.																			.
Query SS confidence															.	.																			.
Query Sequence		G	A	Q	K	R	P	T	V	I	S	V	V	G	.	.	A	G	G	K	T	S	L	L	F	W	L	A	E	L	L	Q	A	S	.	G	R	R	V	L	I	T	T	T	T	H	M	F	M	P	T	S	H	W	P	V	V	F	C	R	D	P	A	M	L	P	H	A	S	L	T	S	P	I	S	F	C	F	H	S	W
Query Conservation															.	.																			.
Alig confidence															.	.																			.							.	.	.	.	.									.	.	.	.	.	.	.																				.
Template Conservation																																										.	.	.	.	.									.	.	.	.	.	.	.																				.
Template Sequence		L	A	A	Q	P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	.	.	.	.	.	V	S	A	D	V	Y	R	P	.	.	.	.	.	.	.	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	.
Template Known Secondary structure		S		S	S	S	S								S	S	S	S	S	S	T	T	T										T	S	S	S					B	.	.	.	.	.						S	S	S	.	.	.	.	.	.	.		S											T	T						.
Template Predicted Secondary structure																																										.	.	.	.	.									.	.	.	.	.	.	.																				.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.						.	.	.	.	.	140	.	.								.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	N	Q	G	K	V	Q	G	F	T	P	E	A	I	D	A	L	V	Q	R	P	E	C	D	V	I	L	I	E	A	D	G	S	R	G	M
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	.	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V
Template Known Secondary structure			S	S				T	T													T	.	T		S											S	S
Template Predicted Secondary structure																							.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions