Return to main results Retrieve Phyre Job Id

Job DescriptionQ46809
Confidence93.90%DateThu Jan 5 12:34:36 GMT 2012
Rank158Aligned Residues75
% Identity28%Templatec2gzaB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:type iv secretion system protein virb11; PDBTitle: crystal structure of the virb11 atpase from the brucella suis type iv2 secretion system in complex with sulphate
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20....... ..30.........40.........50.........60.........70.........80.........90.....
Predicted Secondary structure 




..






























Query SS confidence 









. .



































































Query Sequence  KRPTVISVVG. . AGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQ
Query Conservation 
   





..







  

 
    
  






 
  
                         
         
Alig confidence 









..












































.......................
Template Conservation       


 
 








 


  
    






  

 
             .......................
Template Sequence  QLERVIVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFLPDHPNHVHLFYPP. . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT

STTSSTTS
TTS
SSS



TT
SS


.......................
Template Predicted Secondary structure 


























.......................
Template SS confidence 















































































   173......180.........190.........200.........210.........220.........
 
   96...100.........110.........120
Predicted Secondary structure 











Query SS confidence 
























Query Sequence  GKVQGFTPEAIDALVQRPECDVILI
Query Conservation 


 

       
      
 


Alig confidence  .....



















Template Conservation  .....      
   

  

 


Template Sequence  . . . . . VTAATLLRSCLRMKPTRILL
Template Known Secondary structure  .....

TTS

S
Template Predicted Secondary structure  .....





Template SS confidence 
























   239240.........250........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions