Job Description Q46809 Confidence 94.90% Date Thu Jan 5 12:34:36 GMT 2012 Rank 123 Aligned Residues 106 % Identity 11% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		K	R	P	T	V	I	S	V	V	G	A	G	G	K	T	S	L	L	F	W	L	A	E	L	L	Q	A	S	G	R	R	V	L	I	T	T	T	T	H	M	F	M	P	T	S	H	W	.	.	.	.	P	V	V	F	C	R	D	P	A	M	L	P	H	A	S	L	T	S	P	I	S	F	C	F	H	S	W	K	A
Query Conservation																																																	.	.	.	.
Alig confidence																																																	.	.	.	.
Template Conservation
Template Sequence		R	F	R	H	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	X	V	S	S	I	Y	A	E	A	G	L	D	P	T	F	V	N	G	G	L	V	K	A	A	G	V	H	A	R	L	G	H	G	R	Y	L	I	A	E	A	D	E	S	D	A	S	F	L	H	L	Q	P	X	V	A	I	V	T	N	I	E
Template Known Secondary structure		T	T	S							S	S	S																T	T												T	T	T	T							S	S	S									T	T	S	G	G	G	G				S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		94	.	.	.	.	.		100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure								.										.	.	.	.	.
Query SS confidence								.										.	.	.	.	.
Query Sequence		N	Q	G	K	V	Q	.	G	F	T	P	E	A	I	D	A	.	.	.	.	.	L	V	Q	R	P	E	C	D	V	I	L	I	E	A	D
Query Conservation								.										.	.	.	.	.
Alig confidence								.										.	.	.	.	.
Template Conservation
Template Sequence		A	D	H	X	D	T	Y	Q	G	D	F	E	N	L	K	Q	T	F	I	N	F	L	H	N	L	P	F	Y	G	R	A	V	X	C	V	D
Template Known Secondary structure		S		S	G	G	G	T	T	T														T	T	S		T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions