 |
Job Description | Q46809 | Confidence | 90.14% | Date | Thu Jan 5 12:34:36 GMT 2012 |
Rank | 258 | Aligned Residues | 32 |
% Identity | 31% | Template | c2am1A_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:udp-n-acetylmuramoylalanine-d-glutamyl-lysine-d-alanyl-d- |
PDBTitle: sp protein ligand 1
|
Resolution | 2.50 Å |
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | P | T | V | I | S | V | V | G | A | G | G | K | T | S | L | L | F | W | L | A | E | L | L | Q | A | S | G | R | R | V | L |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|   |   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
|
|
|
|   |
|
|
|
|
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
Template Sequence |   |
T | V | D | V | F | A | V | T | G | S | N | G | K | T | T | T | K | D | X | L | A | H | L | L | S | T | R | Y | K | T | Y | K |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
| S | S | S |
|  |  |  |  |  |  |  |  |  | T | T | T | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|