Job Description Q46809 Confidence 97.46% Date Thu Jan 5 12:34:36 GMT 2012 Rank 37 Aligned Residues 106 % Identity 19% Template c1j8yF_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:signal recognition 54 kda protein; PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant Resolution 2.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	A	L	V	I	D	L	G	A	Q	K	R	P	T	V	I	S	V	V	G	A	G	G	K	T	S	L	L	F	W	L	A	E	L	L	Q	A	S	G	R	R	V	L	I	T	T	T	T	H	M	F	M	P	T	S	H	W	P	V	V	F	C	R	D	P	A	M	L	P	H	A	S	L	T	S	P	I	S	F
Query Conservation
Alig confidence																										.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	D	K	E	P	K	V	I	P	D	K	I	P	Y	V	I	M	L	V	G	V	Q	G	.	.	T	T	A	G	K	L	A	Y	F	Y	K	K	K	G	F	K	V	G	L	V	G	A	D	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	R	P	A	A	L	E	Q	L	Q	Q	L	G	Q	Q	I	G	V
Template Known Secondary structure		T		S						S		S	S	S	S								S			.	.													T	T											S	.	.	.	.	.	.	.	.	.	.	.	.	S															T
Template Predicted Secondary structure																										.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.													.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F	H	S	W	K	A	N	Q	G	K	V	Q	G	F	T	P	E	A	I	D	A	L	V	Q	R	P	E	C	D	V	I	L	I	E	A	D	G	S	R	G	M
Query Conservation
Alig confidence						.																						.
Template Conservation						.																						.
Template Sequence		P	V	Y	G	.	E	P	G	E	K	D	V	V	G	I	A	K	R	G	V	E	K	F	L	S	E	.	K	M	E	I	I	I	V	D	T	A	G	R	H	G	Y
Template Known Secondary structure						.		T	T																		T	.	T		S									S			T
Template Predicted Secondary structure						.																						.
Template SS confidence
		155	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions