 |
Job Description | Q46809 | Confidence | 95.29% | Date | Thu Jan 5 12:34:36 GMT 2012 |
Rank | 108 | Aligned Residues | 60 |
% Identity | 15% | Template | c1j6uA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:udp-n-acetylmuramate-alanine ligase murc; |
PDBTitle: crystal structure of udp-n-acetylmuramate-alanine ligase2 murc (tm0231) from thermotoga maritima at 2.3 a resolution
|
Resolution | 2.30 Å |
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | D | P | S | A | L | V | I | D | L | G | A | Q | K | R | P | T | V | I | S | V | V | G | A | G | G | K | T | S | L | L | F | W | L | A | E | L | L | Q | A | S | G | R | R | V | L | I | T | T | T | T | H | M | F | M | P | T | S | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|   |   |   |   |
|   |   |
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | E | N | R | L | H | Y | F | R | D | T | L | K | R | E | K | K | E | E | F | A | V | T | G | T | D | G | K | T | T | T | T | A | X | V | A | H | V | L | K | H | L | R | K | S | P | T | V | F | L | G | G | I | X | D | S | L | E | H | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |
| S | S |
|
| T | T | S | T | T | S |
Template Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|