Job Description P0AGI4 Confidence 96.88% Date Thu Jan 5 11:29:15 GMT 2012 Rank 1 Aligned Residues 216 % Identity 11% Template c2nq2A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:hypothetical abc transporter permease protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter. Resolution 2.40 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.								.	.	.	.	.	.	90	.	.
Predicted Secondary structure																													.	.	.	.	.																											.						.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.																											.						.	.	.	.	.	.	.
Query Sequence		N	L	Q	V	F	V	M	I	A	A	I	I	A	I	M	L	F	F	T	W	T	T	D	G	A	Y	L	.	.	.	.	.	S	A	R	N	V	S	N	L	L	R	Q	T	A	I	T	G	I	L	A	V	G	M	V	F	V	I	.	I	S	A	E	I	.	.	.	.	.	.	.	D	L	S	V	G	S	M	M	G
Query Conservation																													.	.	.	.	.																											.						.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.																											.						.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	P	K	I	L	F	G	L	T	L	L	L	V	I	T	A	V	I	S	L	G	I	G	R	Y	S	L	S	V	P	Q	I	D	P	V	Q	Q	Q	V	I	F	Q	V	R	L	P	R	I	L	T	A	L	C	V	G	A	G	L	A	L	S	G	V	V	L	Q	G	I	F	R	N	P	L	V	N	P	H	I	I	G
Template Known Secondary structure																					T	T	S	S	T	T			S	S														T																										T	T		T	T			T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
				93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	L	L	G	G	V	A	A	I	C	D	V	W	L	G	W	P	L	P	L	T	I	I	V	T	L	V	L	G	L	L	L	G	A	W	N	G	W	W	V	A	Y	R	K	V	P	S	F	I	V	T	L	A	G	M	L	A	F	R	G	I	L	I	G	I	T	N	G	T	T	V	S	P	T	S	A	A	M	S
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		V	T	S	G	S	A	F	G	G	T	L	A	I	F	F	G	F	S	L	Y	G	L	F	T	S	T	I	L	F	G	F	G	T	L	A	L	V	F	L	F	S	F	K	S	L	L	M	L	I	L	I	G	M	I	L	S	G	L	F	S	A	L	V	S	L	L	Q	Y	I	S	D	T	E	E	K	L	P	S	I	V
Template Known Secondary structure																T	T																										T																											S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	G	Q	S	Y	L	P	A	S	T	G	F	I	I	G	A	L	G	L	M	A	F	V	G	W	Q	W	R	G	R	M	R	R	Q	A	L	G	L	Q	S	P	A	S	T	A	V	V	G	R	Q	A	L	T	A	I	I	V	L	G	A	I	W	L	L	N	D	Y	R	G	V	P	T	P	V	L	L	L	T	L
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	W	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	F	A	T	S	N	W	E	K	L	L	F	F	F	V	P	F	L	L
Template Known Secondary structure				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.																																																									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	G	G	M	F	M	A	T	R	T	A	F	G	R	R	I	Y	A	I	G	G	N	L	E	A	A	R	L	S	G	I	N	V	E	R	T	K	L	A	V	F	A	I	N	G	L	M	V	A	I	A
Query Conservation
Alig confidence									.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.
Template Sequence		C	S	S	I	L	L	S	.	.	.	.	.	.	L	S	W	R	L	N	L	L	S	L	D	E	K	E	A	K	A	L	G	V	K	M	A	P	L	R	W	L	V	I	F	L	S	G	S	L	V	A	C	Q
Template Known Secondary structure									.	.	.	.	.	.	T	T	T	G	G	G	G	G	G	S								T	T
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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