Return to main results Retrieve Phyre Job Id

Job DescriptionQ5H775
Confidence98.65%DateThu Jan 5 12:37:19 GMT 2012
Rank110Aligned Residues113
% Identity17%Templated1uija1
SCOP infoDouble-stranded beta-helix RmlC-like cupins Germin/Seed storage 7S protein
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90........ .100.... .....110.........120.........130.........140...
Predicted Secondary structure 




















......





.


















Query SS confidence 



























. . . . . .





.






































Query Sequence  EKPDEPQVVINQDDLIEMGSQGVSMKLV. . . . . . HNGNPN. RTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTI
Query Conservation                              ......      .                         
   

 
      
Alig confidence 



























......





.















.





















Template Conservation     


 
           

 
 



  
      
  
    
      
    .

 
  
 

 

  
 
 
  
Template Sequence  DENNPFYFRSSNSFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTIL. LPHHADADFLLFVLSGRAILTL
Template Known Secondary structure 

S
TT


GGGS
SS


GGGGGGTT

TT.SS
Template Predicted Secondary structure 
































.







Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.. .......70.........80....
 
   144.....150.........160........ .170.........180....
Predicted Secondary structure  ....










.








Query SS confidence  . . . .
























.















Query Sequence  . . . . NGQDYHLVAGQSYAINTGIPHSFSN. TSAGICRIISAHTPTT
Query Conservation  ....      
  

 
       
   
.        
 
  

 
Alig confidence  ....
























.















Template Conservation 
         
  


  



  
   
    
 
 

      
Template Sequence  VNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVN
Template Known Secondary structure 
SS

TT

TT


SS

SS
Template Predicted Secondary structure 





















Template SS confidence 













































   85....90.........100.........110.........120.........130
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions