Job Description Q5H775 Confidence 99.56% Date Thu Jan 5 12:37:19 GMT 2012 Rank 23 Aligned Residues 163 % Identity 13% Template c3bdnB_ PDB info PDB header:transcription/dna Chain: B: PDB Molecule:lambda repressor; PDBTitle: crystal structure of the lambda repressor Resolution 3.91 Å

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		1	.	.	.	.	.	.					.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		M	S	D	E	G	L	A	.	.	.	.	P	G	K	R	L	S	E	I	R	Q	Q	Q	G	L	S	Q	R	R	A	A	E	L	S	G	L	T	H	S	A	I	S	T	I	E	Q	D	K	V	S	P	A	I	S	T	L	Q	K	L	L	K	V	Y	G	L	S	L	S	E	F	F	S	E	P	E	K	P	D	E	P
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.
Template Conservation
Template Sequence		L	T	Q	E	Q	L	E	D	A	R	R	L	K	A	I	Y	E	K	K	K	N	E	L	G	L	S	Q	E	S	V	A	D	K	M	G	M	G	Q	S	G	V	G	A	L	F	N	G	I	N	A	L	N	A	Y	N	A	A	L	L	A	K	I	L	K	V	S	V	E	E	F	S	P	S	I	A	R	E	I	Y	E
Template Known Secondary structure																																		T	T	T	S		S	S	S	T						T	S	S														T	T	S		S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	V	I	N	Q	D	D	L	I	E	M	G	S	Q	G	V	S	M	K	L	V	H	N	G	N	P	N	R	T	L	A	M	I	F	E	T	Y	Q	P	G	T	T	T	G	E	R	I	K	H	Q	G	E	E	I	G	T	V	L	E	G	E	I	V	L	T	I	N	G	Q	D	Y	H	L	V	A	G	Q	S	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	Y	E	A	V	S	M	Q	P	S	L	R	S	E	Y	E	Y	P	V	F	S	H	V	Q	A	G	M	F	S	P	E	L	R	T	F	T	K	G	D	A	E	R	W	V	S	T	T	K	K	A	S	D	S	A	F	W	L	E	V	E	G	N	S	M	T	A	P	T	G	S	K	P	S	F	P	D	G	M	L	I
Template Known Secondary structure					T	S	S							S								S	S	S			S		S	S	S				T	T		S									S	S					T	T								S		S	S			S	S	S	S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		157	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	N	T	G	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	D	P	E	Q	A
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions