Job Description Q5H775 Confidence 98.22% Date Thu Jan 5 12:37:19 GMT 2012 Rank 127 Aligned Residues 146 % Identity 18% Template c2zklA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:capsular polysaccharide synthesis enzyme cap5f; PDBTitle: crystal structure of capsular polysaccharide assembling protein capf2 from staphylococcus aureus Resolution 2.61 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Q	R	R	A	A	E	L	S	G	L	T	H	S	A	I	S	T	I	E	Q	D	K	V	S	P	A	I	S	T	L	Q	K	L	L	K	V	Y	G	L	S	L	S	E	F	F	S	E	P	E	K	P	D	E	P	Q	V	V	I	N	Q	D	D	L	I	E	M	G	S	Q	G	V	S	M	K	L	V	H	N
Query Conservation
Alig confidence												.	.	.	.																						.																																				.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.																						.																																				.	.	.	.	.	.	.	.	.
Template Sequence		V	T	L	G	E	I	V	D	L	L	.	.	.	.	Y	K	F	K	Q	S	R	L	D	R	T	L	P	K	L	D	N	L	F	E	K	.	D	L	Y	S	T	Y	L	S	Y	L	P	S	T	D	F	S	Y	P	L	L	M	N	V	D	D	R	G	S	F	T	E	F	I	K	T	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												.	.	.	.						T	T	T	T	T					T	T	S					.									T	S		T	T		S										S	S										.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.																						.																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																													.	.	.	.	.	.												.	.
Query SS confidence																																													.	.	.	.	.	.												.	.
Query Sequence		G	N	P	N	R	T	L	A	M	I	F	E	T	Y	Q	P	G	T	T	T	G	E	R	I	K	H	Q	G	E	E	I	G	T	V	L	E	G	E	I	V	L	T	I	.	.	.	.	.	.	N	G	Q	D	Y	H	L	V	A	G	Q	.	.	S	Y	A	I	N	T	G	I	P	H	S	F	S	N	T	S	A	G
Query Conservation																																													.	.	.	.	.	.												.	.
Alig confidence		.	.	.																																									.	.	.	.	.	.												.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	P	D	R	G	Q	V	S	V	N	I	S	K	P	G	I	T	K	G	N	H	W	H	H	T	K	N	E	K	F	L	V	V	S	G	K	G	V	I	R	F	R	H	V	N	D	D	E	I	I	E	Y	Y	V	S	G	D	K	L	E	V	V	D	I	P	V	G	Y	T	H	N	I	E	N	L	G	D	T
Template Known Secondary structure		.	.	.	S	S	S										T	T									S	S										S									T	T											T	T	B								T	T									S	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	R	I	I	S	A	H	T	P	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	M	V	T	I	M	W	V	N	E	M
Template Known Secondary structure										S	S
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions