Job Description Q5H775 Confidence 99.36% Date Thu Jan 5 12:37:19 GMT 2012 Rank 70 Aligned Residues 140 % Identity 11% Template c2fjrB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:repressor protein ci; PDBTitle: crystal structure of bacteriophage 186 Resolution 1.95 Å

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		10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		K	R	L	S	E	I	R	Q	Q	Q	G	L	.	S	Q	R	R	A	A	E	L	S	G	L	T	H	S	A	I	S	T	I	E	Q	D	K	V	S	P	A	I	S	T	L	Q	K	L	L	K	V	Y	G	L	S	L	S	E	F	F	S	E	P	E	K	P	D	E	P	Q	V	V	I	N	Q	D	D	L	I	E	M
Query Conservation														.
Alig confidence														.																												.																																							.
Template Conservation																																										.																																							.
Template Sequence		D	V	L	D	R	I	C	E	A	Y	G	F	S	Q	K	I	Q	L	A	N	H	F	D	I	A	S	S	S	L	S	N	R	Y	T	R	G	A	I	S	Y	.	D	F	A	A	H	C	A	L	E	T	G	A	N	L	Q	W	L	L	T	G	E	G	E	A	F	V	N	N	R	E	S	S	D	A	K	R	I	E	.
Template Known Secondary structure												T		S		T					T	T	T	T												S	S	S				.																			S		S	S		S			T	T	T	T	S	S	S						.
Template Predicted Secondary structure																																										.																																							.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	Q	G	V	S	M	K	L	V	H	N	G	N	P	N	R	T	L	A	M	I	F	E	T	Y	Q	P	G	T	T	T	G	E	R	I	K	H	Q	G	E	E	I	G	T	V	L	E	G	E	I	V	L	T	I	N	G	Q	D	Y	H	L	V	A	G	Q	S	Y	A	I	N
Query Conservation
Alig confidence		.	.	.	.	.																																															.	.	.
Template Conservation		.	.	.	.	.																																															.	.	.
Template Sequence		.	.	.	.	.	G	F	T	L	S	E	E	I	L	K	S	D	K	Q	L	S	V	D	A	Q	F	F	T	K	P	L	T	D	G	M	A	I	R	S	E	G	K	I	Y	F	V	D	K	Q	A	S	.	.	.	L	S	D	G	L	W	L	V	D	I	K	G	A	I	S	I	R
Template Known Secondary structure		.	.	.	.	.						T	T												G	G	G		S	S			T	T							T	T							T	T			.	.	.	S		S								T	T
Template Predicted Secondary structure		.	.	.	.	.																																															.	.	.
Template SS confidence
							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions