Return to main results Retrieve Phyre Job Id

Job DescriptionQ5H775
Confidence78.61%DateThu Jan 5 12:37:19 GMT 2012
Rank339Aligned Residues23
% Identity22%Templatec1l9uH_
PDB info PDB header:transcriptionChain: H: PDB Molecule:sigma factor siga; PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.
Predicted Secondary structure 






Query SS confidence 






















Query Sequence  QGLSQRRAAELSGLTHSAISTIE
Query Conservation   


   

   


 
 

 

Alig confidence 






















Template Conservation     

 


  



 






Template Sequence  REHTLEEVGAYFGVTRERIRQIE
Template Known Secondary structure 



TTS
S
Template Predicted Secondary structure 






Template SS confidence 






















   394.....400.........410......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions