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Job DescriptionP76628
Confidence1.46%DateThu Jan 5 12:25:05 GMT 2012
Rank80Aligned Residues126
% Identity12%Templatec3lrcC_
PDB info PDB header:transport proteinChain: C: PDB Molecule:arginine/agmatine antiporter; PDBTitle: structure of e. coli adic (p1)
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280.........290.........300.........310.........320.........330.........
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Query Sequence  GALGARPAGGFADKGKSHHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHITNQTVIYRIHPDARNRLTA
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Template Sequence  GLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAY
Template Known Secondary structure  S
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   308.310.........320.........330.........340.........350.........360.........370.........380.......
 
   340.........350.........360.........370.........380.........390..
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Query Sequence  GYMTSYFIGGAAGSLISASAWQHGGWAGVCLAGATIALVNLLVWWRGFHRQEA
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Template Sequence  LAVTTIAFLYCIWAVV. . . . . . . GSGAKEVMWSFVTLMVITAMYALNYNRLHK
Template Known Secondary structure  .......SS
TTTS




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   388.390.........400... ......410.........420.........430...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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