Job Description P76628 Confidence 1.56% Date Thu Jan 5 12:25:05 GMT 2012 Rank 67 Aligned Residues 209 % Identity 10% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		K	P	N	H	E	L	S	P	A	L	I	V	L	M	S	I	A	T	G	L	A	V	A	S	N	Y	Y	A	Q	P	L	L	D	T	I	A	R	N	F	S	L	S	A	S	S	A	G	F	I	V	T	A	A	Q	L	G	Y	A	A	G	L	L	F	L	V	P	L	G	D	.	.	M	F	E	R	R	R	L	I	V
Query Conservation																																																																							.	.
Alig confidence																																		.	.	.	.	.																																	.	.
Template Conservation																																		.	.	.	.	.
Template Sequence		A	Q	P	I	E	S	D	A	T	S	D	R	F	S	M	L	G	S	M	V	L	W	L	F	W	P	S	F	A	T	A	I	.	.	.	.	.	V	P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	G	K	A	S	I	V	D	M	A	N
Template Known Secondary structure		T	S																													T	T	.	.	.	.	.	S		G	G	G																											T	T	T
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.						.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	T	L	L	A	A	G	G	M	L	I	T	A	S	S	Q	S	L	A	M	M	I	L	G	T	A	L	T	G	L	F	S	V	V	A	Q	I	L	V	P	L	A	A	T	L	A	S	P	D	K	R	G	K	V	V	G	T	I	M	S	G	L	L	L	G	I	L	L	A	R	T	V	A	G	L	L	A	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	L	A	G	G	V	A	I	G	S	V	C	N	I	V	G	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V	A
Template Known Secondary structure			T	T							T	T	T	T	T	T	S																						T									S					T	T						T	T														S	T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	W	R	T	V	F	W	V	A	S	V	L	M	A	L	M	A	L	A	L	W	R	G	L	P	Q	M	K	S	E	T	H	L	N	Y	P	Q	L	L	G	S	V	F	S	M	F	I	S	D	K	I	L	R	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E	F	I	H	L	A	G	P	E	D	E	H	K	A	E	R	L	V	L
Template Known Secondary structure																										T	T				S	S	T	T		G	G	G	T	S	S	S				G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions