Return to main results Retrieve Phyre Job Id

Job DescriptionP64622
Confidence17.30%DateThu Jan 5 12:09:59 GMT 2012
Rank3Aligned Residues39
% Identity44%Templatec3m3gA_
PDB info PDB header:polysaccharide-binding proteinChain: A: PDB Molecule:epl1 protein; PDBTitle: crystal structure of sm1, an elicitor of plant defence responses from2 trichoderma virens.
Resolution1.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40...... ...50...... ...60...
Predicted Secondary structure 














....









.....
Query SS confidence 





















. . . .









. . . . .






Query Sequence  PVYDDQGRLVHTNTCMKGTTQD. . . . NWETAGAIAG. . . . . GAAAVAG
Query Conservation 





















....









.....






Alig confidence 





















....









.....






Template Conservation    

    

  
 

 
 


  
 
  
 
  
 

 



  

 
Template Sequence  TGYDNGSRSLNDVSCSDGPNGLETRYHWSTQGQIPRFPYIGGAAAVAG
Template Known Secondary structure  GGGG
TT
BGGGSSSSSSTTS


BGGGSTTTTSTT

S
Template Predicted Secondary structure 





































Template SS confidence 















































   25....30.........40.........50.........60.........70..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions