Job Description P77735 Confidence 46.40% Date Thu Jan 5 12:32:17 GMT 2012 Rank 47 Aligned Residues 169 % Identity 17% Template d1qopa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.4

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.																						.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																												.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	D	S	L	R	R	L	G	M	D	Y	V	D	I	L	Q	I	H	R	W	D	Y	N	T	P	I	E	E	T	L	E	A	L	N	D	V	V	K	A	G	K	.	A	R	Y	I	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	M	H	A	S	Q	F	A	Q
Query Conservation																																												.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	E	N	L	F	A	Q	L	N	D	R	R	E	G	A	F	V	P	F	V	T	L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	D	A	G	A	D	A	L	E	L	G	V	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	N	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E
Template Known Secondary structure												T	T										T	T	S	S															T	T		S	S								S			T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	L	Q	K	Q	H	G	W	A	Q	F	V	S	M	Q	D	H	Y	N	L	I	Y	R	E	E	E	R	E	M	L	P	L	C	Y	Q	E	G	V	A	V	I	P	W	S	P	L	A	R	G	R	L	T	R	P	W	G	E	T	T	A	R	L	V	S	D	E	V	G	K	N	L	Y	K	E	S	D	E	N
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	A	I	I	R	E	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N	N	G	I	D	A	F	Y	A	R	C	E	Q	V	G	V	D	S	V	L	V	A	D	V	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											S	S	S													T	T													T							T	T			G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300																	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	Q	I	A	E	R	L	T	G	V	S	E	E	L	G	A	T	R	A	Q	V	A	L	A	W	L	L	S	K	P	G	I	A	A	P	I	I	G	T	S	R	E	E	Q	L	D	E	L	L	N	A	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	L	K	P	E	Q	I	A	E
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	I	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	I	C	P	P	N	A	D	D	D	L	L	R	Q	V	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	S	G	V	T	G	A	E	N	R	G	P	L	H	H	L	I	E	K
Template Known Secondary structure		.	.	G	G											T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T															S						S	S	S	S				S	S	S
Template Predicted Secondary structure		.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150															.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	T	P	Y	K	P	H	P	V	V	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	E	Y	H	A	A	P	A	L	Q	G	F
Template Known Secondary structure					T	T								S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions