Job Description P77735 Confidence 100.00% Date Thu Jan 5 12:32:17 GMT 2012 Rank 40 Aligned Residues 257 % Identity 24% Template c3ln3A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrodiol dehydrogenase; PDBTitle: crystal structure of putative reductase (np_038806.2) from2 mus musculus at 1.18 a resolution Resolution 1.18 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		Q	Y	N	P	L	G	K	T	D	L	R	V	S	R	L	C	L	G	C	M	T	F	G	E	P	D	R	G	N	H	A	W	T	L	P	E	E	S	S	R	P	I	I	K	R	A	L	E	G	G	I	N	F	F	D	T	A	N	S	Y	S	D	G	S	S	E	E	I	V	G	R	A	L	R	D	F	A	.	.	R
Query Conservation																																																																															.	.
Alig confidence							.																		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.														.	.
Template Conservation							.																		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Sequence		Q	H	C	V	L	.	N	D	G	H	L	I	P	A	L	G	F	G	T	Y	P	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	S	L	E	A	A	C	L	A	L	D	V	G	Y	R	H	V	D	T	A	Y	A	Y	Q	.	.	.	V	E	E	E	I	G	Q	A	I	Q	S	I	A	G	V	V
Template Known Secondary structure				B			.	T	T	S				B	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.														T								G	G	G	T	.	.	.
Template Predicted Secondary structure							.																		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template SS confidence
		5	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.														.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																		130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	D	V	V	V	A	T	K	V	F	H	R	V	G	D	L	P	E	G	L	S	R	A	Q	I	L	R	S	I	D	D	S	L	R	R	L	G	M	D	Y	V	D	I	L	Q	I	H	R	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	N	T	P	I	E	E	T	L	E	A	L
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	D	L	F	V	T	T	K	L	W	C	T	C	F	R	P	.	.	.	.	.	.	.	.	.	.	E	L	V	P	A	L	E	S	L	L	Q	L	D	Y	V	D	L	Y	I	X	H	Y	P	V	P	X	S	G	D	N	D	F	P	V	N	E	Q	G	S	L	L	D	T	V	D	F	C	D	T	W	E	R	L
Template Known Secondary structure			T	T									G	G	G		S	G	.	.	.	.	.	.	.	.	.	.	G	G											S			S					S		S						S		S	S				T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.											.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	V	V	K	A	G	K	A	R	Y	I	G	A	S	S	M	H	A	S	Q	F	A	Q	A	L	E	L	Q	K	Q	H	G	W	A	Q	F	V	S	M	Q	D	H	Y	N	L	I	Y	R	E	E	E	R	E	M	L	P	L	C	Y	Q	E	G	V	A	V	I	P	W	S	P	L	A	R	G	R	L	T	R	P
Query Conservation
Alig confidence					.	.																								.	.	.	.	.																			.	.	.						.
Template Conservation					.	.																								.	.	.	.	.																			.	.	.						.
Template Sequence		E	E	C	.	.	D	A	G	L	V	S	I	G	V	S	N	F	N	H	R	Q	L	E	R	I	L	N	P	.	.	.	.	.	G	L	Y	P	V	C	N	Q	V	E	C	H	L	Y	L	N	Q	R	.	.	.	L	L	D	Y	C	.	E	S	D	I	V	L	V	A	Y	G	A	L	G	T	Q	R	Y	E	W	V
Template Known Secondary structure					.	.			S								S													.	.	.	.	.												B	T	T	B				.	.	.						.										S	T	T	S							S
Template Predicted Secondary structure					.	.																								.	.	.	.	.																			.	.	.						.
Template SS confidence
		152	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	G	E	T	T	A	R	L	V	S	D	E	V	G	K	N	L	Y	K	E	S	D	E	N	D	A	Q	I	A	E	R	L	T	G	V	S	E	E	L	G	A	T	R	A	Q	V	A	L	A	W	L	L	S	K	P	G	I	A	A	P	I	I	G	T	S	R	E	E	Q	L	D	E	L	L	N	A	V	D	I	T
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.											.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.											.
Template Sequence		D	Q	N	S	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	N	D	P	V	L	C	D	V	A	N	R	S	P	A	L	I	A	L	R	Y	L	I	Q	R	G	.	.	I	V	P	L	A	Q	S	F	E	N	.	E	X	R	E	N	L	Q	V	F	G	F	Q
Template Known Secondary structure			T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G																							T	T	.	.											.						G	G	G	G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.											.
Template SS confidence
		229	230	.	.	.	.																							.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	P	E	Q	I	A	E	L	E	T	P	Y	K	P	H	P	V	V	G
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		L	S	P	E	D	X	T	.	L	D	G	L	N	N	F	R	Y	L	P	A
Template Known Secondary structure				T	T	T			.	G	G	G	G					S
Template Predicted Secondary structure									.
Template SS confidence
		288	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions