Job Description P77735 Confidence 100.00% Date Thu Jan 5 12:32:17 GMT 2012 Rank 39 Aligned Residues 260 % Identity 22% Template c3krbB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:aldose reductase; PDBTitle: structure of aldose reductase from giardia lamblia at 1.75a resolution Resolution 1.75 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.								.	80	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.
Query Sequence		V	S	R	L	C	L	G	C	M	T	F	G	E	P	D	R	G	N	H	A	W	T	L	P	E	E	S	S	R	P	I	I	K	R	A	L	E	G	G	I	N	F	F	D	T	A	N	S	Y	S	D	G	S	S	E	E	I	V	G	R	A	L	R	D	F	A	.	.	.	.	.	.	.	R	R	E	D	V	V	V
Query Conservation																																																																				.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.														.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Sequence		P	P	R	L	G	F	G	T	W	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	P	P	E	A	V	Q	T	A	V	E	T	A	L	M	T	G	Y	R	H	I	D	C	A	Y	V	Y	Q	.	.	.	N	E	E	A	I	G	R	A	F	G	K	I	F	K	D	A	S	S	G	I	K	R	E	D	V	W	I
Template Known Secondary structure				S	B					T	.	.	.	.	.	.	.	.	.	.	.	.	T																	T								G	G	G	S	.	.	.														T		G	G	G	S			G	G	G
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.													.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																						.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	K	V	F	H	R	V	G	D	L	P	E	G	L	S	R	A	Q	I	L	R	S	I	D	D	S	L	R	R	L	G	M	D	Y	V	D	I	L	Q	I	H	R	W	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	T	P	I	E	E	T	L	E	A	L	N	D
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence		T	S	K	L	W	N	Y	N	H	.	.	.	.	.	.	R	P	E	L	V	R	E	Q	C	K	K	T	M	S	D	L	Q	V	D	Y	L	D	L	F	L	V	H	W	P	L	A	F	V	R	N	D	V	G	D	L	F	P	K	D	A	E	G	R	A	M	L	E	K	V	P	L	A	D	T	W	R	A	M	E	Q
Template Known Secondary structure							G	G	G		.	.	.	.	.	.	S																T		S										S			B				T	T			S	S		B		T	T	S		B		B
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.							.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	K	A	G	K	A	R	Y	I	G	A	S	S	M	H	A	S	Q	F	A	Q	A	L	E	L	Q	K	Q	H	G	W	A	Q	F	V	S	M	Q	D	H	Y	N	L	I	Y	R	E	E	E	R	E	M	L	P	L	C	Y	Q	E	G	V	A	V	I	P	W	S	P	L	A	R	G	R	L	T	R	P	W	G
Query Conservation
Alig confidence																													.	.	.	.																.	.
Template Conservation																													.	.	.	.																.	.
Template Sequence		L	V	E	E	G	L	V	K	H	I	G	V	S	N	Y	T	V	P	L	L	A	D	L	L	N	Y	A	.	.	.	.	K	I	K	P	L	V	N	Q	I	E	I	H	P	W	H	.	.	P	N	D	A	T	V	K	F	C	L	D	N	G	I	G	V	T	A	Y	S	P	M	G	G	S	Y	A	T	Q	K	N	V
Template Known Secondary structure						T	S								S														.	.	.	.	S	S			S							B	T	T	B	.	.												T	T							S	T	T			S	B				B		G
Template Predicted Secondary structure																													.	.	.	.																.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		E	T	T	A	R	L	V	S	D	E	V	G	K	N	L	Y	K	E	S	D	E	N	D	A	Q	I	A	E	R	L	T	G	V	S	E	E	L	G	A	T	R	A	Q	V	A	L	A	W	L	L	S	K	P	G	I	.	.	A	A	P	I	I	G	T	S	R	E	E	Q	L	D	E	L	L	N	A	V	D	I	T
Query Conservation																																																									.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	C	K	T	L	K	A	I	A	D	A	K	G	T	S	P	H	C	V	A	L	A	W	H	V	K	K	W	N	T	S	M	Y	S	V	I	P	K	S	Q	T	P	A	R	I	E	A	N	F	K	C	T	E	V	Q
Template Known Secondary structure		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G												T	S														T		S	T	T						B		S	S								G	G	G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224																								.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	P	E	Q	I	A	E	L	E	T	P	Y	K	P	H	P	V	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	D	D	D	M	D	A	I	N	N	I	H	L	N	K	R	I	R	F
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions