Job Description P77735 Confidence 30.38% Date Thu Jan 5 12:32:17 GMT 2012 Rank 61 Aligned Residues 173 % Identity 11% Template c3ewbX_ PDB info PDB header:transferase Chain: X: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of n-terminal domain of putative 2-2 isopropylmalate synthase from listeria monocytogenes Resolution 2.10 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	T	L	P	E	E	S	S	R	P	I	I	K	R	A	L	E	G	G	I	N	F	F	D	T	A	N	S	Y	S	D	G	S	S	E	E	I	V	G	R	A	L	R	D	F	A	R	R	E	D	V	V	V	A	T	K	V	F	H	R	V	G	D	L	P	E	G	L	S	R	A	Q	I	L	R	S	I	D	D
Query Conservation
Alig confidence																																	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	N	F	D	V	K	E	K	I	Q	I	A	L	Q	L	E	K	L	G	I	D	V	I	E	A	G	F	P	I	S	.	S	P	G	D	F	E	C	V	K	A	I	A	K	A	I	K	H	C	S	V	T	G	L	A	R	C	.	.	.	.	.	.	.	.	.	.	.	V	E	G	D	I	D	R	A	E	E	A
Template Known Secondary structure																					T		S							G	G	G	.																	S	S								S	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																	.																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70												.	.	.	.	.	.	.	.	.	80	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.										130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.
Query Sequence		S	L	R	R	L	G	M	D	Y	V	D	I	L	Q	I	H	R	W	.	.	.	.	.	.	.	.	.	D	Y	N	T	P	I	E	E	T	L	E	A	L	N	D	V	V	K	A	G	K	A	R	Y	I	G	A	S	S	M	H	A	S	Q	F	A	Q	A	L	E	L	Q	K	Q	H	G	W	A	Q	F	V	S	M
Query Conservation																				.	.	.	.	.	.	.	.	.
Alig confidence		.																		.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	L	K	D	A	V	S	P	Q	I	H	I	F	L	A	T	S	D	V	H	X	E	Y	K	L	K	X	S	R	A	E	V	L	A	S	I	K	H	H	I	S	Y	A	R	Q	K	F	D	V	V	Q	F	S	P	E	D	A	T	R	S	D	R	A	F	L	I	E	A	V	Q	T	A	I	D	A	G	A	T	V	I
Template Known Secondary structure		.		T	T		S	S										S							T	T																				T	T		S								T	G	G	G	S															T	T
Template Predicted Secondary structure		.
Template SS confidence
			87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.								.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure														.	.											.	.	.	.	.	.	.
Query SS confidence														.	.											.	.	.	.	.	.	.
Query Sequence		Q	D	H	Y	N	L	I	Y	R	E	E	E	.	.	R	E	M	L	P	L	C	Y	Q	E	.	.	.	.	.	.	.	G	V	A	V	I	P	W	S	P	L	A	R	G
Query Conservation														.	.											.	.	.	.	.	.	.
Alig confidence														.	.											.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	P	D	T	V	G	Y	T	N	P	T	E	F	G	Q	L	F	Q	D	L	R	R	E	I	K	Q	F	D	D	I	I	F	A	S	H	C	H	D	D	L	G	X	A
Template Known Secondary structure						S	S	S																			T	T	G	G	G	S							B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions