Job Description P77735 Confidence 100.00% Date Thu Jan 5 12:32:17 GMT 2012 Rank 5 Aligned Residues 293 % Identity 32% Template c3erpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: structure of idp01002, a putative oxidoreductase from and essential2 gene of salmonella typhimurium Resolution 1.55 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		M	Q	Y	N	P	L	G	K	T	D	L	R	V	S	R	L	C	L	G	C	M	T	F	G	E	P	D	R	G	N	H	A	W	T	L	P	E	E	S	S	R	P	I	I	K	R	A	L	E	G	G	I	N	F	F	D	T	A	N	S	Y	S	.	.	D	G	S	S	E	E	I	V	G	R	A	L	R	D	F	A
Query Conservation																																																																.	.
Alig confidence																											.	.	.	.	.	.	.																															.	.
Template Conservation																											.	.	.	.	.	.	.
Template Sequence		M	E	Y	R	R	C	G	R	S	G	V	K	L	P	A	I	S	L	G	L	W	H	N	F	G	.	.	.	.	.	.	.	D	T	T	R	V	E	N	S	R	A	L	L	Q	R	A	F	D	L	G	I	T	H	F	D	L	A	N	N	Y	G	P	P	P	G	S	A	E	C	N	F	G	R	I	L	Q	E	D	F
Template Known Secondary structure								S	S	S	S					S						S	S	S		S	.	.	.	.	.	.	.	T	T	S															T	T								T	T		T	T	T	T	T														T
Template Predicted Secondary structure																											.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		79			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure			.	.																				.	.
Query SS confidence			.	.																				.	.
Query Sequence		R	.	.	R	E	D	V	V	V	A	T	K	V	F	H	R	V	G	D	L	P	E	.	.	G	L	S	R	A	Q	I	L	R	S	I	D	D	S	L	R	R	L	G	M	D	Y	V	D	I	L	Q	I	H	R	W	D	Y	N	T	P	I	E	E	T	L	E	A	L	N	D	V	V	K	A	G	K	A	R	Y	I
Query Conservation			.	.																				.	.
Alig confidence			.	.																				.	.
Template Conservation
Template Sequence		L	P	W	R	D	E	L	I	I	S	T	K	A	G	Y	T	M	W	D	G	P	Y	G	D	W	G	S	R	K	Y	L	I	A	S	L	D	Q	S	L	K	R	M	G	L	E	Y	V	D	I	F	Y	H	H	R	P	D	P	E	T	P	L	K	E	T	M	K	A	L	D	H	L	V	R	H	G	K	A	L	Y	V
Template Known Secondary structure		G	G	G	G	G	G								S	S			S	S	S	T	T	S	S	T	T																	T		S									S			T	T	S															T	T	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	S	S	M	H	A	S	Q	F	A	Q	A	L	E	L	Q	K	Q	H	G	W	A	Q	F	V	S	M	Q	D	H	Y	N	L	I	Y	R	E	E	E	R	E	M	L	P	L	C	Y	Q	E	G	V	A	V	I	P	W	S	P	L	A	R	G	R	L	T	R	P	W	G	E	T	T	A	R	L	V	S	D	E
Query Conservation
Alig confidence																							.																																																		.	.	.	.	.	.	.	.	.
Template Conservation																							.																																																		.	.	.	.	.	.	.	.	.
Template Sequence		G	I	S	N	Y	P	A	D	L	A	R	Q	A	I	D	I	L	E	D	L	G	.	T	P	C	L	I	H	Q	P	K	Y	S	L	F	E	R	W	V	E	D	G	L	L	A	L	L	Q	E	K	G	V	G	S	I	A	F	S	P	L	A	G	G	Q	L	T	D	R	Y	L	N	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S																	T	.									B		B	T	T	B		G	G	G	G	T									T						B	S	T	T	G	G	G	T	S	S	G	G	G	T		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		V	G	K	N	L	Y	K	E	S	D	E	N	D	A	Q	I	A	E	R	L	T	G	V	S	E	E	L	G	A	T	R	A	Q	V	A	L	A	W	L	L	S	K	P	G	I	A	A	P	I	I	G	T	S	R	E	E	Q	L	D	E	L	L	N	A	V	.	D	I	T	L	K	P	E	Q	I	A	E	L	E	T
Query Conservation																																																																			.
Alig confidence		.	.	.	.	.	.	.	.																																																										.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	I	T	A	D	K	L	E	K	V	R	R	L	N	E	L	A	A	R	R	G	Q	K	L	S	Q	M	A	L	A	W	V	L	R	N	D	N	V	T	S	V	L	I	G	A	S	K	P	S	Q	I	E	D	A	V	G	M	L	A	N	R	R	F	S	A	A	E	C	A	E	I	D	A
Template Known Secondary structure		.	.	.	.	.	.	.	.																			T	T												T	T	T	S										S	S										G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		314	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	K	P	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	E	G	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions