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Job DescriptionP77735
Confidence20.70%DateThu Jan 5 12:32:17 GMT 2012
Rank72Aligned Residues187
% Identity11%Templatec3bolB_
PDB info PDB header:transferaseChain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60... ......70....... ..80.........90
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Query Sequence  TFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSD. . . . . . . . . . GSSEEIVGRALRDF. ARREDVVVATKVF
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Template Sequence  KYGYDDLPEELNIKAPDVVLKVHRSYIESGSDVILTNTFGATRMKLRKHGLEDKLDPIVRNAVRIARRAAGEKLVFGDIG
Template Known Secondary structure  GGT

S
GGG
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S
TT
SGGGT
GGGTTS
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   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   91....... .100.........110.........120.........130.........140
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Query Sequence  HRVGDLPE. . GLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLE. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PTGELPYPLGSTLFEEFYENFRETVEIMVEEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTD
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BTTTSSB
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   108.110.........120.........130.........140.........150.........160.........170.........180.......
 
   141........150........ .160.........170.........180.........190.........200.........
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Query Sequence  . . . ALNDVVKAGKARYIGASS. MHASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVI
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Template Sequence  PANFAITFDELD. IDALGINCSLGPEEILPIFQELSQYTDKFLVVEPNAGYPLKPHDFAVHIDSYYELGVNIF
Template Known Secondary structure  TSS.
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   188.190......... 200.........210.........220.........230.........240.........250.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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